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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1276.7
nTPM
FANTOM5:
1320.3
Scaled Tags Per Million
Pig:
2280.5
nTPM
Allen mouse:
7.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1276.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1276.7
2301
Female, age 85, both hemispheres
1976.6
2188
Female, age 91, both hemispheres
1428.3
2090
Male, age 80, both hemispheres
1224.1
1984
Male, age 76, both hemispheres
477.6
Dorsal cochlear nucleus nTPM: 776.5
2187
Female, age 91, both hemispheres
1019.5
2378
Male, age 80, both hemispheres
813.3
2802
Male, age 74, right hemisphere
775.4
2370
Male, age 61, both hemispheres
670.0
2058
Male, age 76, both hemispheres
604.3
Dorsal tegmental nucleus nTPM: 742.3
2083
Male, age 80, both hemispheres
920.5
2326
Male, age 74, both hemispheres
773.1
1936
Male, age 76, left hemisphere
702.5
2358
Male, age 61, both hemispheres
573.1
Dorsolateral tegmental area nTPM: 773.0
2751
Female, age 85, both hemispheres
1041.3
2337
Male, age 61, both hemispheres
977.5
2654
Male, age 80, both hemispheres
944.4
2360
Male, age 74, both hemispheres
502.4
2141
Male, age 76, both hemispheres
399.5
Kolliker-Fuse nucleus nTPM: 923.4
2793
Female, age 91, left hemisphere
1451.4
2163
Male, age 80, both hemispheres
816.0
2315
Male, age 76, right hemisphere
502.9
Lateral lemniscal nuclei nTPM: 812.0
2320
Female, age 91, left hemisphere
1217.4
2169
Male, age 76, both hemispheres
755.6
2036
Male, age 80, both hemispheres
749.1
2746
Female, age 85, left hemisphere
685.0
2453
Male, age 74, right hemisphere
653.0
Lateral parabrachial nucleus nTPM: 932.1
2792
Male, age 76, both hemispheres
1460.2
2013
Male, age 80, both hemispheres
959.6
2790
Male, age 61, both hemispheres
714.9
2139
Female, age 85, right hemisphere
593.9
Lateral vestibular nucleus nTPM: 947.1
2311
Male, age 80, both hemispheres
1135.1
2184
Male, age 76, both hemispheres
759.1
Locus coeruleus nTPM: 379.4
2720
Male, age 74, both hemispheres
606.2
2162
Male, age 80, both hemispheres
555.8
2317
Female, age 72, unknown
374.4
2123
Female, age 91, both hemispheres
305.3
2788
Male, age 74, unknown
304.6
2014
Male, age 55, unknown
296.7
1980
Male, age 76, both hemispheres
212.7
Medial parabrachial nucleus nTPM: 909.2
2170
Female, age 91, both hemispheres
1102.6
2463
Female, age 85, right hemisphere
910.0
2854
Male, age 80, both hemispheres
891.1
2786
Male, age 76, both hemispheres
855.9
2156
Male, age 61, both hemispheres
786.3
Medial periolivary nuclei nTPM: 783.4
2458
Female, age 91, both hemispheres
1158.2
2081
Male, age 80, both hemispheres
898.5
2063
Male, age 76, both hemispheres
652.5
2791
Male, age 74, right hemisphere
609.5
2171
Female, age 85, both hemispheres
598.4
Motor facial nucleus nTPM: 915.3
2697
Female, age 85, both hemispheres
1417.2
2126
Male, age 61, both hemispheres
1073.9
2795
Female, age 91, both hemispheres
925.6
2327
Male, age 80, both hemispheres
808.7
2365
Male, age 74, right hemisphere
731.5
2062
Male, age 76, both hemispheres
534.9
Motor trigeminal nucleus nTPM: 990.0
2321
Female, age 91, both hemispheres
1367.3
2309
Male, age 76, both hemispheres
1039.8
2335
Male, age 61, both hemispheres
933.7
2560
Male, age 74, both hemispheres
832.8
2079
Male, age 80, both hemispheres
776.4
Nuclei of the trapezoid body nTPM: 787.9
2166
Male, age 80, both hemispheres
1212.8
2368
Female, age 91, both hemispheres
958.0
2159
Male, age 61, both hemispheres
703.9
1983
Male, age 76, both hemispheres
618.3
2735
Female, age 85, both hemispheres
446.4
Nucleus raphe magnus nTPM: 651.3
2328
Male, age 80, both hemispheres
964.1
2459
Female, age 91, both hemispheres
920.7
2051
Male, age 76, both hemispheres
678.9
2455
Male, age 74, both hemispheres
658.2
2172
Female, age 85, both hemispheres
370.2
2160
Male, age 61, both hemispheres
315.7
Paramedian reticular nucleus nTPM: 814.2
2052
Male, age 76, both hemispheres
1023.0
2057
Male, age 80, both hemispheres
805.6
2313
Male, age 61, both hemispheres
721.0
2050
Female, age 85, both hemispheres
707.3
Pedunculopontine tegmental nucleus nTPM: 736.3
2338
Male, age 61, both hemispheres
848.2
2334
Male, age 80, both hemispheres
817.5
1921
Female, age 85, both hemispheres
543.2
Pontine nuclei nTPM: 797.2
2319
Female, age 91, both hemispheres
1260.3
2454
Male, age 74, left hemisphere
1049.3
2109
Female, age 72, unknown
922.0
1968
Male, age 76, left hemisphere
889.2
2115
Male, age 80, left hemisphere
857.3
1863
Male, age 55, unknown
667.0
2787
Female, age 85, both hemispheres
429.3
2727
Male, age 61, right hemisphere
302.9
Pontine raphe nucleus nTPM: 518.1
2122
Female, age 85, midline
554.1
2853
Male, age 76, midline
482.1
Posteroventral cochlear nucleus nTPM: 1133.0
2135
Female, age 91, both hemispheres
1605.3
2341
Male, age 80, both hemispheres
1334.0
2371
Male, age 61, both hemispheres
1073.7
2070
Male, age 76, both hemispheres
1031.1
2752
Female, age 85, both hemispheres
620.9
Principal sensory trigeminal nucleus nTPM: 795.7
2367
Female, age 91, left hemisphere
1197.1
2324
Male, age 76, both hemispheres
828.3
2008
Male, age 80, left hemisphere
599.9
2158
Male, age 61, both hemispheres
557.7
Reticular pontine nucleus, caudal nTPM: 917.7
2457
Female, age 91, both hemispheres
1041.0
2559
Male, age 74, both hemispheres
986.0
2092
Male, age 76, both hemispheres
927.2
2332
Male, age 80, right hemisphere
716.8
Reticular pontine nucleus, oral nTPM: 919.7
2366
Female, age 91, both hemispheres
1409.8
2167
Male, age 76, both hemispheres
909.3
1939
Male, age 80, both hemispheres
827.7
2012
Female, age 85, both hemispheres
782.5
2361
Male, age 74, both hemispheres
669.2
Reticulotegmental nucleus nTPM: 772.0
2322
Female, age 91, both hemispheres
876.5
2452
Male, age 74, both hemispheres
818.8
2333
Male, age 80, both hemispheres
815.7
2325
Male, age 76, both hemispheres
577.2
Spinal trigeminal nucleus, oral nTPM: 711.0
2164
Male, age 80, both hemispheres
910.1
1978
Male, age 76, both hemispheres
715.2
2737
Female, age 85, both hemispheres
507.6
Subcoeruleus area nTPM: 814.1
2369
Female, age 85, left hemisphere
1222.6
2089
Male, age 76, left hemisphere
803.1
1958
Male, age 80, both hemispheres
760.5
2451
Male, age 74, both hemispheres
735.6
2323
Female, age 91, left hemisphere
548.9
Superior olive nTPM: 954.1
2020
Male, age 76, both hemispheres
1189.6
2561
Female, age 91, both hemispheres
1171.2
2329
Male, age 80, right hemisphere
1075.8
1875
Female, age 85, both hemispheres
671.6
2364
Male, age 74, right hemisphere
662.2
Ventral periolivary nuclei nTPM: 940.9
2023
Male, age 76, both hemispheres
1295.7
2794
Female, age 91, left hemisphere
950.6
2165
Male, age 80, both hemispheres
834.7
2130
Female, age 85, both hemispheres
682.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 869.4
2456
Female, age 91, both hemispheres
1091.5
2359
Male, age 61, both hemispheres
1073.0
1959
Male, age 76, both hemispheres
837.5
2161
Male, age 80, both hemispheres
816.4
2840
Female, age 85, both hemispheres
777.2
2449
Male, age 74, both hemispheres
621.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
2280.5
Pig sample
Sample description
nTPM
Pons nTPM: 2280.5
Samples: 4
Max nTPM: 4116.3
Min nTPM: 1350.0
Sample A
Female
1350.0
Sample B
Female
1488.2
Sample C
Male
2167.3
Sample D
Male
4116.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
