HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:261.9 nTPM
HPA Brain:472.1 nTPM
GTEx:261.9 nTPM
FANTOM5:340.5 Scaled Tags Per Million
Pig:1339.2 nTPM
Mouse:160.0 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035152
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 472.1
Sample id Sample description nTPM
Hippocampus
nTPM: 305.3
1911 Female, age 85, right hemisphere 418.1
2529 Female, age 94, left hemisphere 377.0
2621 Female, age 67, right hemisphere 321.7
1898 Male, age 80, left hemisphere 264.3
1855 Male, age 76, left hemisphere 234.1
2148 Female, age 91, left hemisphere 216.8
Dentate gyrus
nTPM: 348.3
2530 Female, age 94, left hemisphere 841.5
2010 Male, age 76, both hemispheres 318.5
2531 Female, age 67, both hemispheres 274.6
2246 Female, age 85, both hemispheres 267.3
2528 Male, age 74, both hemispheres 251.3
1927 Female, age 91, both hemispheres 136.8
Entorhinal gyrus
nTPM: 341.7
2117 Female, age 91, right hemisphere 496.0
2764 Male, age 80, right hemisphere 416.3
2686 Male, age 75, right hemisphere 385.0
1938 Female, age 85, left hemisphere 274.2
2613 Female, age 94, left hemisphere 269.8
1787 Male, age 76, left hemisphere 208.7
Hippocampus, CA1
nTPM: 226.7
1873 Female, age 85, both hemispheres 294.8
2082 Female, age 91, right hemisphere 283.2
2527 Male, age 74, both hemispheres 268.9
2749 Male, age 80, left hemisphere 215.2
2045 Male, age 76, both hemispheres 71.4
Hippocampus, CA2
nTPM: 303.2
1963 Male, age 80, left hemisphere 461.6
2437 Female, age 94, left hemisphere 374.9
2249 Male, age 74, both hemispheres 316.4
2113 Female, age 91, right hemisphere 268.5
1940 Female, age 85, left hemisphere 252.7
1892 Male, age 76, both hemispheres 145.1
Hippocampus, CA3
nTPM: 191.9
1891 Female, age 85, both hemispheres 428.5
1867 Male, age 76, both hemispheres 192.4
2861 Female, age 67, both hemispheres 165.6
2436 Male, age 74, both hemispheres 147.7
2137 Male, age 80, left hemisphere 129.0
2620 Female, age 94, left hemisphere 87.9
Parahippocampal cortex
nTPM: 260.8
2532 Female, age 72, left hemisphere 499.6
2692 Male, age 74, both hemispheres 413.7
1990 Female, age 91, right hemisphere 289.5
1850 Male, age 80, both hemispheres 249.1
2018 Male, age 76, both hemispheres 241.7
2622 Female, age 67, right hemisphere 238.1
2245 Female, age 91, both hemispheres 232.3
1933 Female, age 85, both hemispheres 212.0
2693 Female, age 94, both hemispheres 121.8
2250 Female, age 67, right hemisphere 110.0
Perirhinal gyrus
nTPM: 130.0
2848 Male, age 76, right hemisphere 177.9
1794 Male, age 80, right hemisphere 163.4
1847 Female, age 91, left hemisphere 114.1
2521 Female, age 94, right hemisphere 105.7
1841 Female, age 85, right hemisphere 88.8
Subiculum
nTPM: 472.1
2042 Male, age 76, both hemispheres 678.1
1901 Male, age 80, both hemispheres 554.8
2438 Female, age 94, left hemisphere 541.6
1977 Female, age 85, both hemispheres 458.4
2619 Male, age 74, both hemispheres 352.3
2729 Female, age 91, right hemisphere 247.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 261.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 261.9
Samples: 197

Max nTPM: 1014.3
Min nTPM: 16.5
Std nTPM: 170.8
Median nTPM: 226.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1014.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 937.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 887.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 757.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 659.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 639.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 617.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 604.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 599.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 587.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 584.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 340.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 340.5
FF:10153-102I9 76 years, female 385.0
FF:10169-103B7 60 years, female 295.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1339.2
Pig sample Sample description nTPM
Subiculum
nTPM: 377.4
Samples: 4

Max nTPM: 514.6
Min nTPM: 220.0
Sample A Female 335.9
Sample B Female 514.6
Sample C Male 220.0
Sample D Male 439.1
Dorsal hippocampus
nTPM: 1339.2
Samples: 4

Max nTPM: 2041.5
Min nTPM: 379.6
Sample A Female 2041.5
Sample B Female 985.4
Sample C Male 1950.2
Sample D Male 379.6
Entorhinal cortex
nTPM: 314.3
Samples: 4

Max nTPM: 489.5
Min nTPM: 157.4
Sample A Female 157.4
Sample B Female 489.5
Sample C Male 188.3
Sample D Male 421.8
Ventral hippocampus
nTPM: 702.9
Samples: 4

Max nTPM: 1210.7
Min nTPM: 322.5
Sample A Female 797.5
Sample B Female 322.5
Sample C Male 480.7
Sample D Male 1210.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.6
Samples: 4

Max nTPM: 104.2
Min nTPM: 35.1
Sample A Male 104.2
Sample B Male 73.5
Sample C Female 89.4
Sample D Female 35.1
Hippocampal formation
nTPM: 160.0
Samples: 4

Max nTPM: 244.1
Min nTPM: 101.4
Sample A Male 101.4
Sample B Male 110.5
Sample C Female 244.1
Sample D Female 183.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69201510 Antisense, RP_050317_03_A10, Mouse strain C57BL/6J (56 days, male) 4.4
69174034 Antisense, RP_050329_01_H11, Mouse strain C57BL/6J (56 days, male) 3.4

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