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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
110.5
nTPM
GTEx:
110.5
nTPM
FANTOM5:
157.7
Scaled Tags Per Million
Pig:
29.8
nTPM
Mouse:
14.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
110.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 110.5
Samples: 105
Max nTPM: 174.6
Min nTPM: 57.5
Std nTPM: 22.2
Median nTPM:
501_1
88 years, male
174.6
81_1
67 years, male
171.9
142_1
61 years, female
165.1
149_1
88 years, male
161.9
495_1
57 years, female
159.0
413_1
59 years, female
152.3
491_1
89 years, female
146.7
315_1
62 years, female
144.1
89_1
63 years, male
141.3
4_1
88 years, female
141.1
406_1
79 years, male
135.8
526_1
61 years, male
135.8
466_1
57 years, female
135.4
414_1
84 years, female
134.8
314_1
67 years, male
133.8
137_1
83 years, male
132.8
264_1
73 years, female
132.1
316_1
62 years, male
129.7
126_1
63 years, male
129.5
396_1
62 years, male
127.8
490_1
67 years, female
127.6
9_1
66 years, female
127.1
139_1
64 years, female
125.1
518_1
75 years, female
124.7
2_1
77 years, female
124.3
322_1
76 years, male
123.5
43_1
64 years, female
122.4
162_1
79 years, female
121.9
480_1
63 years, male
121.8
308_1
70 years, female
121.6
319_1
81 years, male
120.8
377_1
82 years, female
119.5
17_1
71 years, male
119.3
35_1
74 years, female
119.1
292_1
71 years, male
117.4
153_1
70 years, female
117.2
288_1
66 years, female
117.1
246_1
77 years, male
116.7
254_1
77 years, female
116.7
313_1
79 years, female
116.4
109_1
81 years, female
115.4
394_1
75 years, female
115.2
311_1
78 years, male
114.5
217_1
76 years, male
113.9
415_1
77 years, female
113.4
229_1
69 years, female
113.0
384_1
83 years, male
113.0
32_1
67 years, male
112.7
499_1
55 years, female
112.7
145_1
84 years, male
112.1
335_1
73 years, female
109.8
266_1
85 years, male
109.3
405_1
91 years, male
109.3
119_1
70 years, female
108.8
468_1
89 years, male
108.3
18_1
88 years, male
108.2
251_1
78 years, male
107.5
503_1
68 years, male
107.5
117_1
61 years, male
106.1
324_1
76 years, male
105.8
389_1
86 years, female
105.5
348_1
84 years, male
105.4
115_1
83 years, male
104.7
307_1
66 years, female
103.9
42_1
85 years, male
103.6
320_1
89 years, female
103.5
286_1
68 years, female
102.5
6_1
73 years, female
101.9
265_1
87 years, male
100.4
376_1
75 years, female
99.7
506_1
65 years, male
98.8
447_1
81 years, male
98.2
293_1
68 years, female
97.8
120_1
70 years, female
97.0
189_1
76 years, male
96.8
517_1
88 years, male
96.8
375_1
74 years, female
96.7
318_1
68 years, male
96.1
295_1
61 years, female
96.0
452_1
88 years, female
95.7
41_1
94 years, female
94.5
243_1
75 years, male
94.4
173_1
67 years, male
91.4
425_1
59 years, female
91.3
321_1
62 years, female
90.0
177_1
74 years, male
89.7
291_1
76 years, male
89.5
379_1
60 years, male
89.2
404_1
82 years, female
88.9
386_1
76 years, male
87.2
351_1
91 years, male
86.2
99_1
64 years, male
85.0
237_1
82 years, male
83.7
317_1
60 years, male
83.0
354_1
81 years, female
82.9
172_1
72 years, female
81.6
347_1
72 years, male
80.8
349_1
83 years, male
79.0
353_1
82 years, female
78.0
355_1
70 years, female
77.6
163_1
78 years, male
77.0
350_1
84 years, female
76.0
352_1
62 years, male
75.9
356_1
87 years, female
71.7
218_1
71 years, female
57.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
