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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
218.8
nTPM
Monaco:
403.7
nTPM
Schmiedel:
780.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.8
HPA sample
nTPM
gdT-cell nTPM: 155.2
Samples: 6
Max nTPM: 192.7
Min nTPM: 109.4
P10809_1007
137.8
P10809_1022
192.7
P10809_1041
173.4
P10809_1060
143.6
P10809_1077
109.4
P10809_1098
174.1
MAIT T-cell nTPM: 137.4
Samples: 6
Max nTPM: 162.3
Min nTPM: 111.5
P10809_1006
132.1
P10809_1024
162.3
P10809_1043
128.7
P10809_1062
136.1
P10809_1083
111.5
P10809_1097
153.6
Memory CD4 T-cell nTPM: 130.8
Samples: 6
Max nTPM: 139.8
Min nTPM: 120.3
P10809_1014
127.3
P10809_1026
131.7
P10809_1045
127.0
P10809_1064
138.8
P10809_1086
120.3
P10809_1113
139.8
Memory CD8 T-cell nTPM: 154.8
Samples: 5
Max nTPM: 172.5
Min nTPM: 122.8
P10809_1012
171.5
P10809_1027
172.5
P10809_1046
151.3
P10809_1065
122.8
P10809_1111
155.7
Naive CD4 T-cell nTPM: 145.6
Samples: 6
Max nTPM: 217.2
Min nTPM: 87.7
P10809_1015
87.7
P10809_1030
164.4
P10809_1049
217.2
P10809_1068
138.9
P10809_1085
129.2
P10809_1112
136.4
Naive CD8 T-cell nTPM: 131.2
Samples: 6
Max nTPM: 173.9
Min nTPM: 101.4
P10809_1016
101.4
P10809_1031
173.9
P10809_1050
136.0
P10809_1069
139.1
P10809_1087
110.9
P10809_1110
125.8
T-reg nTPM: 218.8
Samples: 6
Max nTPM: 293.7
Min nTPM: 181.9
P10809_1018
218.6
P10809_1037
181.9
P10809_1056
293.7
P10809_1075
184.2
P10809_1094
223.7
P10809_1106
210.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
403.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 270.9
Samples: 4
Max nTPM: 293.9
Min nTPM: 251.5
RHH5202_R3573
283.4
RHH5230_R3602
251.5
RHH5259_R3631
293.9
RHH5288_R3660
254.9
Effector memory CD8 T-cell nTPM: 403.7
Samples: 4
Max nTPM: 529.8
Min nTPM: 319.7
RHH5203_R3574
529.8
RHH5231_R3603
319.7
RHH5260_R3632
413.7
RHH5289_R3661
351.5
MAIT T-cell nTPM: 313.2
Samples: 4
Max nTPM: 441.5
Min nTPM: 230.4
RHH5233_R3605
284.0
RHH5205_R3576
441.5
RHH5262_R3634
296.9
RHH5297_R3663
230.4
Memory CD4 T-cell TFH nTPM: 234.0
Samples: 4
Max nTPM: 274.8
Min nTPM: 202.8
RHH5300_R3666
202.8
RHH5236_R3608
205.2
RHH5265_R3637
253.2
RHH5208_R3579
274.8
Memory CD4 T-cell Th1 nTPM: 273.9
Samples: 4
Max nTPM: 309.8
Min nTPM: 251.5
RHH5210_R3581
254.0
RHH5302_R3668
251.5
RHH5238_R3610
280.3
RHH5267_R3639
309.8
Memory CD4 T-cell Th1/Th17 nTPM: 286.0
Samples: 4
Max nTPM: 339.8
Min nTPM: 247.8
RHH5303_R3669
276.0
RHH5211_R3582
339.8
RHH5239_R3611
280.5
RHH5268_R3640
247.8
Memory CD4 T-cell Th17 nTPM: 267.5
Samples: 4
Max nTPM: 298.3
Min nTPM: 229.8
RHH5304_R3670
266.7
RHH5212_R3583
298.3
RHH5240_R3612
275.0
RHH5269_R3641
229.8
Memory CD4 T-cell Th2 nTPM: 257.7
Samples: 4
Max nTPM: 327.0
Min nTPM: 224.0
RHH5305_R3671
224.4
RHH5213_R3584
327.0
RHH5241_R3613
255.5
RHH5270_R3642
224.0
Naive CD4 T-cell nTPM: 181.4
Samples: 4
Max nTPM: 197.3
Min nTPM: 169.4
RHH5306_R3672
169.4
RHH5214_R3585
197.3
RHH5242_R3614
173.3
RHH5271_R3643
185.6
Naive CD8 T-cell nTPM: 189.0
Samples: 4
Max nTPM: 197.2
Min nTPM: 181.2
RHH5201_R3572
194.3
RHH5229_R3601
197.2
RHH5258_R3630
183.3
RHH5287_R3659
181.2
Non-Vd2 gdTCR nTPM: 341.2
Samples: 4
Max nTPM: 405.2
Min nTPM: 294.4
RHH5235_R3607
294.4
RHH5264_R3636
342.8
RHH5207_R3578
405.2
RHH5299_R3665
322.4
T-reg nTPM: 240.4
Samples: 4
Max nTPM: 254.8
Min nTPM: 213.4
RHH5301_R3667
213.4
RHH5237_R3609
254.8
RHH5266_R3638
248.3
RHH5209_R3580
245.0
Terminal effector memory CD4 T-cell nTPM: 339.6
Samples: 2
Max nTPM: 360.2
Min nTPM: 318.9
RHH5243_R3615
360.2
RHH5272_R3644
318.9
Terminal effector memory CD8 T-cell nTPM: 347.9
Samples: 4
Max nTPM: 356.2
Min nTPM: 339.3
RHH5232_R3604
356.2
RHH5204_R3575
350.1
RHH5261_R3633
339.3
RHH5296_R3662
345.9
Vd2 gdTCR nTPM: 314.0
Samples: 4
Max nTPM: 416.4
Min nTPM: 237.4
RHH5234_R3606
281.4
RHH5206_R3577
416.4
RHH5263_R3635
320.6
RHH5298_R3664
237.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.