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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
307.9
nTPM
Monaco:
453.6
nTPM
Schmiedel:
252.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
307.9
HPA sample
nTPM
gdT-cell nTPM: 129.6
Samples: 6
Max nTPM: 184.6
Min nTPM: 91.1
P10809_1007
107.3
P10809_1022
184.6
P10809_1041
180.4
P10809_1060
91.1
P10809_1077
102.5
P10809_1098
111.9
MAIT T-cell nTPM: 116.9
Samples: 6
Max nTPM: 134.9
Min nTPM: 95.7
P10809_1006
118.3
P10809_1024
134.9
P10809_1043
120.6
P10809_1062
95.7
P10809_1083
111.8
P10809_1097
119.8
Memory CD4 T-cell nTPM: 201.3
Samples: 6
Max nTPM: 277.7
Min nTPM: 143.6
P10809_1014
192.9
P10809_1026
229.5
P10809_1045
277.7
P10809_1064
147.5
P10809_1086
143.6
P10809_1113
216.4
Memory CD8 T-cell nTPM: 175.2
Samples: 5
Max nTPM: 224.4
Min nTPM: 118.8
P10809_1012
165.7
P10809_1027
197.4
P10809_1046
224.4
P10809_1065
118.8
P10809_1111
169.9
Naive CD4 T-cell nTPM: 307.9
Samples: 6
Max nTPM: 373.8
Min nTPM: 225.4
P10809_1015
246.7
P10809_1030
347.6
P10809_1049
373.8
P10809_1068
299.6
P10809_1085
225.4
P10809_1112
354.2
Naive CD8 T-cell nTPM: 253.3
Samples: 6
Max nTPM: 289.0
Min nTPM: 151.4
P10809_1016
279.4
P10809_1031
289.0
P10809_1050
265.0
P10809_1069
261.9
P10809_1087
151.4
P10809_1110
272.9
T-reg nTPM: 296.3
Samples: 6
Max nTPM: 382.4
Min nTPM: 229.6
P10809_1018
250.8
P10809_1037
322.1
P10809_1056
382.4
P10809_1075
229.6
P10809_1094
283.8
P10809_1106
309.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
453.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 339.2
Samples: 4
Max nTPM: 408.3
Min nTPM: 253.1
RHH5202_R3573
408.3
RHH5230_R3602
375.5
RHH5259_R3631
319.8
RHH5288_R3660
253.1
Effector memory CD8 T-cell nTPM: 290.4
Samples: 4
Max nTPM: 346.5
Min nTPM: 209.4
RHH5203_R3574
346.5
RHH5231_R3603
320.4
RHH5260_R3632
285.3
RHH5289_R3661
209.4
MAIT T-cell nTPM: 199.8
Samples: 4
Max nTPM: 238.4
Min nTPM: 159.2
RHH5233_R3605
238.4
RHH5205_R3576
197.1
RHH5262_R3634
204.4
RHH5297_R3663
159.2
Memory CD4 T-cell TFH nTPM: 453.6
Samples: 4
Max nTPM: 547.3
Min nTPM: 362.9
RHH5300_R3666
362.9
RHH5236_R3608
439.6
RHH5265_R3637
547.3
RHH5208_R3579
464.6
Memory CD4 T-cell Th1 nTPM: 339.2
Samples: 4
Max nTPM: 393.3
Min nTPM: 271.5
RHH5210_R3581
393.3
RHH5302_R3668
326.0
RHH5238_R3610
271.5
RHH5267_R3639
366.0
Memory CD4 T-cell Th1/Th17 nTPM: 304.1
Samples: 4
Max nTPM: 367.5
Min nTPM: 208.7
RHH5303_R3669
323.5
RHH5211_R3582
367.5
RHH5239_R3611
208.7
RHH5268_R3640
316.6
Memory CD4 T-cell Th17 nTPM: 291.7
Samples: 4
Max nTPM: 308.9
Min nTPM: 273.0
RHH5304_R3670
273.0
RHH5212_R3583
308.9
RHH5240_R3612
285.1
RHH5269_R3641
299.6
Memory CD4 T-cell Th2 nTPM: 311.3
Samples: 4
Max nTPM: 345.8
Min nTPM: 273.7
RHH5305_R3671
273.7
RHH5213_R3584
337.4
RHH5241_R3613
288.4
RHH5270_R3642
345.8
Naive CD4 T-cell nTPM: 435.9
Samples: 4
Max nTPM: 470.9
Min nTPM: 415.3
RHH5306_R3672
415.3
RHH5214_R3585
420.8
RHH5242_R3614
436.5
RHH5271_R3643
470.9
Naive CD8 T-cell nTPM: 446.9
Samples: 4
Max nTPM: 584.1
Min nTPM: 288.1
RHH5201_R3572
584.1
RHH5229_R3601
288.1
RHH5258_R3630
465.7
RHH5287_R3659
449.5
Non-Vd2 gdTCR nTPM: 181.2
Samples: 4
Max nTPM: 195.2
Min nTPM: 164.0
RHH5235_R3607
170.4
RHH5264_R3636
195.2
RHH5207_R3578
164.0
RHH5299_R3665
195.0
T-reg nTPM: 431.7
Samples: 4
Max nTPM: 457.7
Min nTPM: 402.3
RHH5301_R3667
402.3
RHH5237_R3609
427.9
RHH5266_R3638
457.7
RHH5209_R3580
438.8
Terminal effector memory CD4 T-cell nTPM: 357.3
Samples: 2
Max nTPM: 371.5
Min nTPM: 343.0
RHH5243_R3615
343.0
RHH5272_R3644
371.5
Terminal effector memory CD8 T-cell nTPM: 222.5
Samples: 4
Max nTPM: 301.2
Min nTPM: 160.4
RHH5232_R3604
301.2
RHH5204_R3575
205.2
RHH5261_R3633
160.4
RHH5296_R3662
223.1
Vd2 gdTCR nTPM: 263.7
Samples: 4
Max nTPM: 378.6
Min nTPM: 176.9
RHH5234_R3606
378.6
RHH5206_R3577
176.9
RHH5263_R3635
287.3
RHH5298_R3664
212.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.