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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.3
nTPM
Monaco:
161.4
nTPM
Schmiedel:
310.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.3
HPA sample
nTPM
gdT-cell nTPM: 87.9
Samples: 6
Max nTPM: 114.5
Min nTPM: 55.6
P10809_1007
55.6
P10809_1022
114.5
P10809_1041
101.0
P10809_1060
95.2
P10809_1077
74.5
P10809_1098
86.3
MAIT T-cell nTPM: 88.3
Samples: 6
Max nTPM: 96.1
Min nTPM: 75.9
P10809_1006
77.7
P10809_1024
96.1
P10809_1043
92.5
P10809_1062
92.4
P10809_1083
75.9
P10809_1097
95.3
Memory CD4 T-cell nTPM: 65.7
Samples: 6
Max nTPM: 74.0
Min nTPM: 52.6
P10809_1014
52.6
P10809_1026
55.9
P10809_1045
71.3
P10809_1064
68.8
P10809_1086
71.5
P10809_1113
74.0
Memory CD8 T-cell nTPM: 79.5
Samples: 5
Max nTPM: 90.2
Min nTPM: 67.6
P10809_1012
67.6
P10809_1027
87.2
P10809_1046
90.2
P10809_1065
75.4
P10809_1111
77.1
Naive CD4 T-cell nTPM: 73.0
Samples: 6
Max nTPM: 95.9
Min nTPM: 50.6
P10809_1015
50.6
P10809_1030
75.3
P10809_1049
95.9
P10809_1068
63.6
P10809_1085
74.5
P10809_1112
77.8
Naive CD8 T-cell nTPM: 81.8
Samples: 6
Max nTPM: 98.8
Min nTPM: 68.1
P10809_1016
74.3
P10809_1031
68.1
P10809_1050
86.6
P10809_1069
98.8
P10809_1087
75.1
P10809_1110
87.9
T-reg nTPM: 66.3
Samples: 6
Max nTPM: 95.8
Min nTPM: 49.0
P10809_1018
49.0
P10809_1037
79.6
P10809_1056
95.8
P10809_1075
53.7
P10809_1094
51.1
P10809_1106
68.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 136.6
Min nTPM: 101.5
RHH5202_R3573
116.7
RHH5230_R3602
136.6
RHH5259_R3631
115.9
RHH5288_R3660
101.5
Effector memory CD8 T-cell nTPM: 156.6
Samples: 4
Max nTPM: 169.4
Min nTPM: 133.1
RHH5203_R3574
156.1
RHH5231_R3603
133.1
RHH5260_R3632
169.4
RHH5289_R3661
167.8
MAIT T-cell nTPM: 161.4
Samples: 4
Max nTPM: 175.5
Min nTPM: 135.7
RHH5233_R3605
170.7
RHH5205_R3576
163.6
RHH5262_R3634
175.5
RHH5297_R3663
135.7
Memory CD4 T-cell TFH nTPM: 108.3
Samples: 4
Max nTPM: 125.7
Min nTPM: 90.8
RHH5300_R3666
90.8
RHH5236_R3608
117.9
RHH5265_R3637
125.7
RHH5208_R3579
98.8
Memory CD4 T-cell Th1 nTPM: 93.8
Samples: 4
Max nTPM: 105.2
Min nTPM: 72.2
RHH5210_R3581
96.4
RHH5302_R3668
105.2
RHH5238_R3610
72.2
RHH5267_R3639
101.5
Memory CD4 T-cell Th1/Th17 nTPM: 111.8
Samples: 4
Max nTPM: 129.7
Min nTPM: 81.9
RHH5303_R3669
123.2
RHH5211_R3582
112.4
RHH5239_R3611
81.9
RHH5268_R3640
129.7
Memory CD4 T-cell Th17 nTPM: 134.2
Samples: 4
Max nTPM: 141.1
Min nTPM: 128.2
RHH5304_R3670
139.0
RHH5212_R3583
128.2
RHH5240_R3612
128.4
RHH5269_R3641
141.1
Memory CD4 T-cell Th2 nTPM: 115.7
Samples: 4
Max nTPM: 138.5
Min nTPM: 106.7
RHH5305_R3671
107.4
RHH5213_R3584
138.5
RHH5241_R3613
106.7
RHH5270_R3642
110.3
Naive CD4 T-cell nTPM: 141.1
Samples: 4
Max nTPM: 183.7
Min nTPM: 115.2
RHH5306_R3672
115.2
RHH5214_R3585
146.9
RHH5242_R3614
118.5
RHH5271_R3643
183.7
Naive CD8 T-cell nTPM: 151.6
Samples: 4
Max nTPM: 185.0
Min nTPM: 122.0
RHH5201_R3572
156.7
RHH5229_R3601
122.0
RHH5258_R3630
185.0
RHH5287_R3659
142.8
Non-Vd2 gdTCR nTPM: 145.7
Samples: 4
Max nTPM: 213.4
Min nTPM: 106.7
RHH5235_R3607
117.6
RHH5264_R3636
213.4
RHH5207_R3578
145.0
RHH5299_R3665
106.7
T-reg nTPM: 109.5
Samples: 4
Max nTPM: 124.2
Min nTPM: 75.7
RHH5301_R3667
75.7
RHH5237_R3609
117.0
RHH5266_R3638
124.2
RHH5209_R3580
121.2
Terminal effector memory CD4 T-cell nTPM: 148.3
Samples: 2
Max nTPM: 150.4
Min nTPM: 146.2
RHH5243_R3615
150.4
RHH5272_R3644
146.2
Terminal effector memory CD8 T-cell nTPM: 147.7
Samples: 4
Max nTPM: 200.7
Min nTPM: 118.4
RHH5232_R3604
130.4
RHH5204_R3575
141.4
RHH5261_R3633
200.7
RHH5296_R3662
118.4
Vd2 gdTCR nTPM: 142.7
Samples: 4
Max nTPM: 188.6
Min nTPM: 103.1
RHH5234_R3606
128.1
RHH5206_R3577
150.8
RHH5263_R3635
188.6
RHH5298_R3664
103.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
