We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
239.3
nTPM
FANTOM5:
289.2
Scaled Tags Per Million
Pig:
56.5
nTPM
Allen mouse:
5.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
239.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 104.2
1984
Male, age 76, both hemispheres
149.9
2301
Female, age 85, both hemispheres
123.5
2188
Female, age 91, both hemispheres
78.6
2090
Male, age 80, both hemispheres
64.9
Dorsal cochlear nucleus nTPM: 89.3
2058
Male, age 76, both hemispheres
120.1
2370
Male, age 61, both hemispheres
99.5
2802
Male, age 74, right hemisphere
84.5
2187
Female, age 91, both hemispheres
83.4
2378
Male, age 80, both hemispheres
58.9
Dorsal tegmental nucleus nTPM: 94.7
1936
Male, age 76, left hemisphere
110.1
2083
Male, age 80, both hemispheres
103.4
2358
Male, age 61, both hemispheres
94.4
2326
Male, age 74, both hemispheres
71.0
Dorsolateral tegmental area nTPM: 73.8
2141
Male, age 76, both hemispheres
113.1
2654
Male, age 80, both hemispheres
89.7
2360
Male, age 74, both hemispheres
81.8
2751
Female, age 85, both hemispheres
53.0
2337
Male, age 61, both hemispheres
31.2
Kolliker-Fuse nucleus nTPM: 119.8
2163
Male, age 80, both hemispheres
124.9
2793
Female, age 91, left hemisphere
119.4
2315
Male, age 76, right hemisphere
115.1
Lateral lemniscal nuclei nTPM: 204.2
2453
Male, age 74, right hemisphere
254.5
2036
Male, age 80, both hemispheres
235.0
2169
Male, age 76, both hemispheres
199.0
2746
Female, age 85, left hemisphere
192.8
2320
Female, age 91, left hemisphere
139.9
Lateral parabrachial nucleus nTPM: 127.2
2139
Female, age 85, right hemisphere
212.1
2790
Male, age 61, both hemispheres
121.0
2013
Male, age 80, both hemispheres
118.1
2792
Male, age 76, both hemispheres
57.8
Lateral vestibular nucleus nTPM: 114.1
2184
Male, age 76, both hemispheres
148.1
2311
Male, age 80, both hemispheres
80.2
Locus coeruleus nTPM: 127.8
2720
Male, age 74, both hemispheres
152.5
2317
Female, age 72, unknown
137.9
2123
Female, age 91, both hemispheres
137.7
1980
Male, age 76, both hemispheres
133.9
2162
Male, age 80, both hemispheres
118.2
2014
Male, age 55, unknown
113.0
2788
Male, age 74, unknown
101.5
Medial parabrachial nucleus nTPM: 108.1
2854
Male, age 80, both hemispheres
128.0
2156
Male, age 61, both hemispheres
122.9
2463
Female, age 85, right hemisphere
104.4
2786
Male, age 76, both hemispheres
104.2
2170
Female, age 91, both hemispheres
80.9
Medial periolivary nuclei nTPM: 190.4
2171
Female, age 85, both hemispheres
310.9
2063
Male, age 76, both hemispheres
208.8
2791
Male, age 74, right hemisphere
203.4
2081
Male, age 80, both hemispheres
115.5
2458
Female, age 91, both hemispheres
113.5
Motor facial nucleus nTPM: 190.1
2062
Male, age 76, both hemispheres
233.4
2365
Male, age 74, right hemisphere
227.7
2327
Male, age 80, both hemispheres
224.7
2795
Female, age 91, both hemispheres
175.3
2697
Female, age 85, both hemispheres
165.7
2126
Male, age 61, both hemispheres
114.0
Motor trigeminal nucleus nTPM: 140.9
2079
Male, age 80, both hemispheres
202.0
2560
Male, age 74, both hemispheres
196.4
2335
Male, age 61, both hemispheres
109.0
2309
Male, age 76, both hemispheres
101.8
2321
Female, age 91, both hemispheres
95.2
Nuclei of the trapezoid body nTPM: 227.5
2735
Female, age 85, both hemispheres
318.0
2159
Male, age 61, both hemispheres
279.9
1983
Male, age 76, both hemispheres
212.4
2166
Male, age 80, both hemispheres
170.5
2368
Female, age 91, both hemispheres
156.8
Nucleus raphe magnus nTPM: 239.3
2160
Male, age 61, both hemispheres
344.0
2172
Female, age 85, both hemispheres
330.7
2455
Male, age 74, both hemispheres
282.4
2328
Male, age 80, both hemispheres
195.6
2051
Male, age 76, both hemispheres
152.1
2459
Female, age 91, both hemispheres
131.1
Paramedian reticular nucleus nTPM: 116.9
2050
Female, age 85, both hemispheres
177.1
2313
Male, age 61, both hemispheres
123.9
2057
Male, age 80, both hemispheres
100.6
2052
Male, age 76, both hemispheres
66.2
Pedunculopontine tegmental nucleus nTPM: 91.6
1921
Female, age 85, both hemispheres
109.2
2334
Male, age 80, both hemispheres
93.7
2338
Male, age 61, both hemispheres
71.8
Pontine nuclei nTPM: 185.5
2787
Female, age 85, both hemispheres
330.8
2727
Male, age 61, right hemisphere
268.7
1863
Male, age 55, unknown
194.9
1968
Male, age 76, left hemisphere
186.2
2109
Female, age 72, unknown
156.6
2115
Male, age 80, left hemisphere
145.2
2454
Male, age 74, left hemisphere
114.8
2319
Female, age 91, both hemispheres
86.9
Pontine raphe nucleus nTPM: 155.6
2122
Female, age 85, midline
193.9
2853
Male, age 76, midline
117.3
Posteroventral cochlear nucleus nTPM: 81.8
2752
Female, age 85, both hemispheres
148.6
2070
Male, age 76, both hemispheres
122.6
2371
Male, age 61, both hemispheres
85.8
2341
Male, age 80, both hemispheres
36.1
2135
Female, age 91, both hemispheres
15.9
Principal sensory trigeminal nucleus nTPM: 193.8
2158
Male, age 61, both hemispheres
313.4
2008
Male, age 80, left hemisphere
235.4
2324
Male, age 76, both hemispheres
130.2
2367
Female, age 91, left hemisphere
96.2
Reticular pontine nucleus, caudal nTPM: 140.1
2332
Male, age 80, right hemisphere
226.6
2092
Male, age 76, both hemispheres
151.7
2457
Female, age 91, both hemispheres
106.8
2559
Male, age 74, both hemispheres
75.4
Reticular pontine nucleus, oral nTPM: 112.7
2361
Male, age 74, both hemispheres
171.1
2012
Female, age 85, both hemispheres
142.5
2366
Female, age 91, both hemispheres
98.0
2167
Male, age 76, both hemispheres
84.7
1939
Male, age 80, both hemispheres
67.3
Reticulotegmental nucleus nTPM: 133.0
2325
Male, age 76, both hemispheres
150.8
2452
Male, age 74, both hemispheres
145.0
2333
Male, age 80, both hemispheres
135.5
2322
Female, age 91, both hemispheres
100.6
Spinal trigeminal nucleus, oral nTPM: 136.7
1978
Male, age 76, both hemispheres
150.6
2737
Female, age 85, both hemispheres
146.6
2164
Male, age 80, both hemispheres
112.7
Subcoeruleus area nTPM: 121.1
2089
Male, age 76, left hemisphere
164.6
1958
Male, age 80, both hemispheres
150.1
2323
Female, age 91, left hemisphere
136.0
2451
Male, age 74, both hemispheres
111.3
2369
Female, age 85, left hemisphere
43.6
Superior olive nTPM: 175.4
1875
Female, age 85, both hemispheres
223.9
2329
Male, age 80, right hemisphere
182.5
2364
Male, age 74, right hemisphere
177.8
2561
Female, age 91, both hemispheres
153.7
2020
Male, age 76, both hemispheres
139.1
Ventral periolivary nuclei nTPM: 224.9
2130
Female, age 85, both hemispheres
333.4
2165
Male, age 80, both hemispheres
256.2
2794
Female, age 91, left hemisphere
187.0
2023
Male, age 76, both hemispheres
123.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 148.4
2449
Male, age 74, both hemispheres
248.4
2161
Male, age 80, both hemispheres
178.5
1959
Male, age 76, both hemispheres
158.2
2840
Female, age 85, both hemispheres
127.1
2456
Female, age 91, both hemispheres
110.0
2359
Male, age 61, both hemispheres
67.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
56.5
Pig sample
Sample description
nTPM
Pons nTPM: 56.5
Samples: 4
Max nTPM: 64.3
Min nTPM: 45.3
Sample A
Female
64.3
Sample B
Female
45.3
Sample C
Male
55.2
Sample D
Male
61.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
