HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		152.834
RNA expressioni
Consensus:24.0 nTPM
HPA Brain:68.0 nTPM
GTEx:24.0 nTPM
FANTOM5:39.8 Scaled Tags Per Million
Mouse:91.6 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014101
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA014101
Hippocampal formation mean intensity 152.834
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 129.467
Molecular layer of the dentate gyrus 152.834
Granular dentate gyrus 126.783
CA1 - oriens layer 123.639
CA1 - pyramidal layer 122.607
CA1 - radiatum layer 136.416
CA2 - oriens layer 111.196
CA2 - pyramidal layer 109.710
CA2 - radiatum layer 117.331
CA3 - oriens layer 102.663
CA3 - pyramidal layer 101.610
CA3 - radiatum layer 131.312
Stratum lucidum 104.284
Lacunosum moleculare 67.104
Subiculum 80.573

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.0
Sample id Sample description nTPM
Hippocampus
nTPM: 45.7
1898 Male, age 80, left hemisphere 59.7
2621 Female, age 67, right hemisphere 56.7
1855 Male, age 76, left hemisphere 54.5
1911 Female, age 85, right hemisphere 42.7
2148 Female, age 91, left hemisphere 37.4
2529 Female, age 94, left hemisphere 22.9
Dentate gyrus
nTPM: 47.8
1927 Female, age 91, both hemispheres 56.3
2010 Male, age 76, both hemispheres 54.7
2531 Female, age 67, both hemispheres 53.8
2246 Female, age 85, both hemispheres 47.8
2530 Female, age 94, left hemisphere 41.2
2528 Male, age 74, both hemispheres 33.1
Entorhinal gyrus
nTPM: 52.0
2764 Male, age 80, right hemisphere 72.3
2613 Female, age 94, left hemisphere 70.2
1787 Male, age 76, left hemisphere 58.0
1938 Female, age 85, left hemisphere 53.5
2686 Male, age 75, right hemisphere 37.2
2117 Female, age 91, right hemisphere 20.6
Hippocampus, CA1
nTPM: 63.2
2749 Male, age 80, left hemisphere 129.0
1873 Female, age 85, both hemispheres 58.0
2045 Male, age 76, both hemispheres 51.5
2082 Female, age 91, right hemisphere 40.0
2527 Male, age 74, both hemispheres 37.5
Hippocampus, CA2
nTPM: 45.0
1963 Male, age 80, left hemisphere 68.3
1892 Male, age 76, both hemispheres 67.5
1940 Female, age 85, left hemisphere 38.4
2437 Female, age 94, left hemisphere 36.7
2113 Female, age 91, right hemisphere 31.1
2249 Male, age 74, both hemispheres 28.0
Hippocampus, CA3
nTPM: 55.8
2137 Male, age 80, left hemisphere 102.7
2620 Female, age 94, left hemisphere 62.1
2861 Female, age 67, both hemispheres 55.6
1867 Male, age 76, both hemispheres 48.5
1891 Female, age 85, both hemispheres 34.6
2436 Male, age 74, both hemispheres 31.5
Parahippocampal cortex
nTPM: 51.2
1850 Male, age 80, both hemispheres 66.0
2532 Female, age 72, left hemisphere 60.5
2245 Female, age 91, both hemispheres 55.9
1933 Female, age 85, both hemispheres 53.3
2622 Female, age 67, right hemisphere 51.9
2250 Female, age 67, right hemisphere 50.0
2693 Female, age 94, both hemispheres 50.0
2018 Male, age 76, both hemispheres 49.6
1990 Female, age 91, right hemisphere 46.7
2692 Male, age 74, both hemispheres 28.4
Perirhinal gyrus
nTPM: 68.0
1794 Male, age 80, right hemisphere 81.9
1847 Female, age 91, left hemisphere 70.3
1841 Female, age 85, right hemisphere 68.9
2521 Female, age 94, right hemisphere 68.6
2848 Male, age 76, right hemisphere 50.3
Subiculum
nTPM: 36.0
1901 Male, age 80, both hemispheres 53.4
1977 Female, age 85, both hemispheres 50.0
2042 Male, age 76, both hemispheres 38.1
2619 Male, age 74, both hemispheres 29.1
2438 Female, age 94, left hemisphere 24.6
2729 Female, age 91, right hemisphere 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.0
Samples: 197

Max nTPM: 75.7
Min nTPM: 0.3
Std nTPM: 17.3
Median nTPM: 21.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 71.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 62.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 61.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 61.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 59.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 58.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.8
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 38.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 81.1
Min nTPM: 66.7
Sample A Male 70.8
Sample B Male 69.7
Sample C Female 66.7
Sample D Female 81.1
Hippocampal formation
nTPM: 91.6
Samples: 4

Max nTPM: 109.6
Min nTPM: 78.7
Sample A Male 78.7
Sample B Male 98.8
Sample C Female 109.6
Sample D Female 79.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
73907497 Antisense, RP_051214_03_A03, Mouse strain C57BL/6J (56 days, male) 20.1
79762114 Antisense, RP_071204_04_A06, Mouse strain C57BL/6J (56 days, male) 15.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org