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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.1
nTPM
Monaco:
50.4
nTPM
Schmiedel:
12.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
HPA sample
nTPM
gdT-cell nTPM: 71.4
Samples: 6
Max nTPM: 96.0
Min nTPM: 50.7
P10809_1007
50.7
P10809_1022
80.6
P10809_1041
96.0
P10809_1060
66.5
P10809_1077
64.2
P10809_1098
70.6
MAIT T-cell nTPM: 68.9
Samples: 6
Max nTPM: 84.7
Min nTPM: 36.9
P10809_1006
36.9
P10809_1024
80.3
P10809_1043
80.9
P10809_1062
62.6
P10809_1083
68.1
P10809_1097
84.7
Memory CD4 T-cell nTPM: 70.0
Samples: 6
Max nTPM: 95.4
Min nTPM: 47.7
P10809_1014
47.7
P10809_1026
95.4
P10809_1045
73.7
P10809_1064
64.9
P10809_1086
68.3
P10809_1113
69.7
Memory CD8 T-cell nTPM: 69.9
Samples: 5
Max nTPM: 89.7
Min nTPM: 40.0
P10809_1012
40.0
P10809_1027
77.1
P10809_1046
89.7
P10809_1065
70.3
P10809_1111
72.4
Naive CD4 T-cell nTPM: 75.1
Samples: 6
Max nTPM: 105.5
Min nTPM: 40.0
P10809_1015
40.0
P10809_1030
76.2
P10809_1049
105.5
P10809_1068
80.7
P10809_1085
70.4
P10809_1112
77.9
Naive CD8 T-cell nTPM: 73.2
Samples: 6
Max nTPM: 96.8
Min nTPM: 47.0
P10809_1016
47.0
P10809_1031
96.8
P10809_1050
83.2
P10809_1069
71.7
P10809_1087
61.5
P10809_1110
79.0
T-reg nTPM: 67.0
Samples: 6
Max nTPM: 86.6
Min nTPM: 36.9
P10809_1018
36.9
P10809_1037
68.0
P10809_1056
83.1
P10809_1075
40.9
P10809_1094
86.3
P10809_1106
86.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.4
Samples: 4
Max nTPM: 47.3
Min nTPM: 33.3
RHH5202_R3573
37.1
RHH5230_R3602
35.9
RHH5259_R3631
33.3
RHH5288_R3660
47.3
Effector memory CD8 T-cell nTPM: 38.5
Samples: 4
Max nTPM: 44.6
Min nTPM: 30.5
RHH5203_R3574
34.8
RHH5231_R3603
43.9
RHH5260_R3632
44.6
RHH5289_R3661
30.5
MAIT T-cell nTPM: 40.3
Samples: 4
Max nTPM: 58.7
Min nTPM: 21.7
RHH5233_R3605
38.6
RHH5205_R3576
21.7
RHH5262_R3634
42.1
RHH5297_R3663
58.7
Memory CD4 T-cell TFH nTPM: 42.4
Samples: 4
Max nTPM: 48.7
Min nTPM: 31.7
RHH5300_R3666
46.4
RHH5236_R3608
48.7
RHH5265_R3637
42.6
RHH5208_R3579
31.7
Memory CD4 T-cell Th1 nTPM: 47.0
Samples: 4
Max nTPM: 63.7
Min nTPM: 32.9
RHH5210_R3581
47.8
RHH5302_R3668
63.7
RHH5238_R3610
43.4
RHH5267_R3639
32.9
Memory CD4 T-cell Th1/Th17 nTPM: 37.3
Samples: 4
Max nTPM: 43.6
Min nTPM: 30.4
RHH5303_R3669
38.1
RHH5211_R3582
43.6
RHH5239_R3611
37.2
RHH5268_R3640
30.4
Memory CD4 T-cell Th17 nTPM: 38.3
Samples: 4
Max nTPM: 42.6
Min nTPM: 33.8
RHH5304_R3670
42.6
RHH5212_R3583
41.2
RHH5240_R3612
33.8
RHH5269_R3641
35.6
Memory CD4 T-cell Th2 nTPM: 37.8
Samples: 4
Max nTPM: 41.1
Min nTPM: 34.4
RHH5305_R3671
41.1
RHH5213_R3584
38.6
RHH5241_R3613
37.1
RHH5270_R3642
34.4
Naive CD4 T-cell nTPM: 38.5
Samples: 4
Max nTPM: 47.3
Min nTPM: 30.4
RHH5306_R3672
39.5
RHH5214_R3585
47.3
RHH5242_R3614
36.9
RHH5271_R3643
30.4
Naive CD8 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 46.1
Min nTPM: 29.0
RHH5201_R3572
29.0
RHH5229_R3601
29.6
RHH5258_R3630
46.1
RHH5287_R3659
36.3
Non-Vd2 gdTCR nTPM: 46.3
Samples: 4
Max nTPM: 61.4
Min nTPM: 29.8
RHH5235_R3607
35.3
RHH5264_R3636
58.8
RHH5207_R3578
29.8
RHH5299_R3665
61.4
T-reg nTPM: 40.9
Samples: 4
Max nTPM: 52.3
Min nTPM: 37.0
RHH5301_R3667
52.3
RHH5237_R3609
37.2
RHH5266_R3638
37.2
RHH5209_R3580
37.0
Terminal effector memory CD4 T-cell nTPM: 39.4
Samples: 2
Max nTPM: 44.4
Min nTPM: 34.3
RHH5243_R3615
34.3
RHH5272_R3644
44.4
Terminal effector memory CD8 T-cell nTPM: 45.1
Samples: 4
Max nTPM: 68.6
Min nTPM: 33.8
RHH5232_R3604
36.2
RHH5204_R3575
68.6
RHH5261_R3633
33.8
RHH5296_R3662
41.8
Vd2 gdTCR nTPM: 50.4
Samples: 4
Max nTPM: 65.7
Min nTPM: 37.6
RHH5234_R3606
37.6
RHH5206_R3577
65.7
RHH5263_R3635
38.7
RHH5298_R3664
59.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
