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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.6
nTPM
Monaco:
285.5
nTPM
Schmiedel:
329.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.6
HPA sample
nTPM
gdT-cell nTPM: 79.6
Samples: 6
Max nTPM: 104.8
Min nTPM: 67.9
P10809_1007
67.9
P10809_1022
104.8
P10809_1041
73.1
P10809_1060
73.8
P10809_1077
78.4
P10809_1098
79.6
MAIT T-cell nTPM: 64.4
Samples: 6
Max nTPM: 77.2
Min nTPM: 49.4
P10809_1006
72.1
P10809_1024
77.2
P10809_1043
62.1
P10809_1062
63.3
P10809_1083
49.4
P10809_1097
62.4
Memory CD4 T-cell nTPM: 57.6
Samples: 6
Max nTPM: 67.5
Min nTPM: 43.0
P10809_1014
52.6
P10809_1026
43.0
P10809_1045
67.5
P10809_1064
56.2
P10809_1086
63.6
P10809_1113
62.7
Memory CD8 T-cell nTPM: 62.6
Samples: 5
Max nTPM: 75.3
Min nTPM: 53.9
P10809_1012
53.9
P10809_1027
57.5
P10809_1046
75.3
P10809_1065
67.0
P10809_1111
59.2
Naive CD4 T-cell nTPM: 58.9
Samples: 6
Max nTPM: 75.0
Min nTPM: 48.7
P10809_1015
51.0
P10809_1030
54.9
P10809_1049
48.7
P10809_1068
63.7
P10809_1085
75.0
P10809_1112
59.9
Naive CD8 T-cell nTPM: 56.6
Samples: 6
Max nTPM: 74.5
Min nTPM: 44.7
P10809_1016
44.7
P10809_1031
51.9
P10809_1050
57.6
P10809_1069
62.7
P10809_1087
74.5
P10809_1110
48.1
T-reg nTPM: 48.0
Samples: 6
Max nTPM: 64.9
Min nTPM: 34.0
P10809_1018
46.8
P10809_1037
34.0
P10809_1056
45.2
P10809_1075
46.0
P10809_1094
64.9
P10809_1106
51.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
285.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 156.4
Samples: 4
Max nTPM: 182.8
Min nTPM: 131.9
RHH5202_R3573
154.4
RHH5230_R3602
156.6
RHH5259_R3631
182.8
RHH5288_R3660
131.9
Effector memory CD8 T-cell nTPM: 186.8
Samples: 4
Max nTPM: 202.3
Min nTPM: 169.1
RHH5203_R3574
175.5
RHH5231_R3603
200.1
RHH5260_R3632
169.1
RHH5289_R3661
202.3
MAIT T-cell nTPM: 168.4
Samples: 4
Max nTPM: 207.5
Min nTPM: 142.0
RHH5233_R3605
174.7
RHH5205_R3576
207.5
RHH5262_R3634
149.5
RHH5297_R3663
142.0
Memory CD4 T-cell TFH nTPM: 154.5
Samples: 4
Max nTPM: 185.0
Min nTPM: 121.9
RHH5300_R3666
121.9
RHH5236_R3608
185.0
RHH5265_R3637
148.8
RHH5208_R3579
162.2
Memory CD4 T-cell Th1 nTPM: 168.3
Samples: 4
Max nTPM: 215.2
Min nTPM: 125.6
RHH5210_R3581
160.6
RHH5302_R3668
125.6
RHH5238_R3610
215.2
RHH5267_R3639
171.9
Memory CD4 T-cell Th1/Th17 nTPM: 184.5
Samples: 4
Max nTPM: 225.6
Min nTPM: 142.1
RHH5303_R3669
142.1
RHH5211_R3582
198.1
RHH5239_R3611
225.6
RHH5268_R3640
172.3
Memory CD4 T-cell Th17 nTPM: 180.8
Samples: 4
Max nTPM: 240.6
Min nTPM: 153.5
RHH5304_R3670
163.3
RHH5212_R3583
165.7
RHH5240_R3612
240.6
RHH5269_R3641
153.5
Memory CD4 T-cell Th2 nTPM: 161.3
Samples: 4
Max nTPM: 205.6
Min nTPM: 133.4
RHH5305_R3671
138.3
RHH5213_R3584
205.6
RHH5241_R3613
167.8
RHH5270_R3642
133.4
Naive CD4 T-cell nTPM: 172.8
Samples: 4
Max nTPM: 185.9
Min nTPM: 141.6
RHH5306_R3672
141.6
RHH5214_R3585
185.9
RHH5242_R3614
178.8
RHH5271_R3643
184.7
Naive CD8 T-cell nTPM: 173.7
Samples: 4
Max nTPM: 200.5
Min nTPM: 128.4
RHH5201_R3572
200.5
RHH5229_R3601
194.2
RHH5258_R3630
128.4
RHH5287_R3659
171.6
Non-Vd2 gdTCR nTPM: 226.8
Samples: 4
Max nTPM: 264.2
Min nTPM: 180.4
RHH5235_R3607
264.0
RHH5264_R3636
198.5
RHH5207_R3578
264.2
RHH5299_R3665
180.4
T-reg nTPM: 132.7
Samples: 4
Max nTPM: 151.4
Min nTPM: 99.0
RHH5301_R3667
99.0
RHH5237_R3609
139.0
RHH5266_R3638
141.2
RHH5209_R3580
151.4
Terminal effector memory CD4 T-cell nTPM: 285.5
Samples: 2
Max nTPM: 347.7
Min nTPM: 223.3
RHH5243_R3615
347.7
RHH5272_R3644
223.3
Terminal effector memory CD8 T-cell nTPM: 233.8
Samples: 4
Max nTPM: 282.7
Min nTPM: 187.2
RHH5232_R3604
282.7
RHH5204_R3575
187.2
RHH5261_R3633
232.7
RHH5296_R3662
232.6
Vd2 gdTCR nTPM: 171.4
Samples: 4
Max nTPM: 216.2
Min nTPM: 128.1
RHH5234_R3606
165.0
RHH5206_R3577
216.2
RHH5263_R3635
176.3
RHH5298_R3664
128.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
