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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
362.8
nTPM
Monaco:
106.1
nTPM
Schmiedel:
501.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
362.8
HPA sample
nTPM
gdT-cell nTPM: 228.3
Samples: 6
Max nTPM: 263.5
Min nTPM: 188.6
P10809_1007
263.5
P10809_1022
188.6
P10809_1041
234.2
P10809_1060
222.4
P10809_1077
230.4
P10809_1098
230.4
MAIT T-cell nTPM: 263.4
Samples: 6
Max nTPM: 304.0
Min nTPM: 217.0
P10809_1006
220.4
P10809_1024
298.8
P10809_1043
217.0
P10809_1062
304.0
P10809_1083
266.6
P10809_1097
273.7
Memory CD4 T-cell nTPM: 354.4
Samples: 6
Max nTPM: 386.0
Min nTPM: 297.2
P10809_1014
386.0
P10809_1026
375.7
P10809_1045
324.7
P10809_1064
366.9
P10809_1086
297.2
P10809_1113
375.6
Memory CD8 T-cell nTPM: 268.5
Samples: 5
Max nTPM: 313.9
Min nTPM: 226.2
P10809_1012
271.2
P10809_1027
313.9
P10809_1046
226.2
P10809_1065
275.8
P10809_1111
255.6
Naive CD4 T-cell nTPM: 361.1
Samples: 6
Max nTPM: 405.6
Min nTPM: 265.3
P10809_1015
405.6
P10809_1030
397.6
P10809_1049
358.8
P10809_1068
385.1
P10809_1085
265.3
P10809_1112
354.0
Naive CD8 T-cell nTPM: 317.5
Samples: 6
Max nTPM: 415.9
Min nTPM: 237.9
P10809_1016
415.9
P10809_1031
371.0
P10809_1050
253.4
P10809_1069
321.9
P10809_1087
237.9
P10809_1110
304.6
T-reg nTPM: 362.8
Samples: 6
Max nTPM: 403.9
Min nTPM: 334.4
P10809_1018
397.0
P10809_1037
334.4
P10809_1056
351.7
P10809_1075
403.9
P10809_1094
348.0
P10809_1106
342.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.1
Samples: 4
Max nTPM: 124.2
Min nTPM: 41.9
RHH5202_R3573
41.9
RHH5230_R3602
79.5
RHH5259_R3631
124.2
RHH5288_R3660
78.9
Effector memory CD8 T-cell nTPM: 44.6
Samples: 4
Max nTPM: 68.2
Min nTPM: 35.2
RHH5203_R3574
35.2
RHH5231_R3603
37.8
RHH5260_R3632
68.2
RHH5289_R3661
37.2
MAIT T-cell nTPM: 55.7
Samples: 4
Max nTPM: 66.1
Min nTPM: 31.7
RHH5233_R3605
31.7
RHH5205_R3576
59.7
RHH5262_R3634
65.3
RHH5297_R3663
66.1
Memory CD4 T-cell TFH nTPM: 66.2
Samples: 4
Max nTPM: 84.9
Min nTPM: 51.8
RHH5300_R3666
65.8
RHH5236_R3608
84.9
RHH5265_R3637
62.2
RHH5208_R3579
51.8
Memory CD4 T-cell Th1 nTPM: 101.7
Samples: 4
Max nTPM: 155.7
Min nTPM: 46.9
RHH5210_R3581
46.9
RHH5302_R3668
105.0
RHH5238_R3610
155.7
RHH5267_R3639
99.1
Memory CD4 T-cell Th1/Th17 nTPM: 80.2
Samples: 4
Max nTPM: 104.3
Min nTPM: 57.1
RHH5303_R3669
74.0
RHH5211_R3582
57.1
RHH5239_R3611
85.3
RHH5268_R3640
104.3
Memory CD4 T-cell Th17 nTPM: 69.1
Samples: 4
Max nTPM: 108.0
Min nTPM: 45.7
RHH5304_R3670
108.0
RHH5212_R3583
45.7
RHH5240_R3612
60.4
RHH5269_R3641
62.4
Memory CD4 T-cell Th2 nTPM: 83.8
Samples: 4
Max nTPM: 122.0
Min nTPM: 70.1
RHH5305_R3671
122.0
RHH5213_R3584
70.1
RHH5241_R3613
71.1
RHH5270_R3642
71.9
Naive CD4 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 146.5
Min nTPM: 63.4
RHH5306_R3672
123.2
RHH5214_R3585
146.5
RHH5242_R3614
63.4
RHH5271_R3643
91.2
Naive CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 120.2
Min nTPM: 47.0
RHH5201_R3572
57.2
RHH5229_R3601
120.2
RHH5258_R3630
47.0
RHH5287_R3659
94.2
Non-Vd2 gdTCR nTPM: 47.3
Samples: 4
Max nTPM: 63.4
Min nTPM: 31.6
RHH5235_R3607
52.4
RHH5264_R3636
41.7
RHH5207_R3578
31.6
RHH5299_R3665
63.4
T-reg nTPM: 79.1
Samples: 4
Max nTPM: 91.5
Min nTPM: 65.7
RHH5301_R3667
91.5
RHH5237_R3609
65.7
RHH5266_R3638
79.3
RHH5209_R3580
80.0
Terminal effector memory CD4 T-cell nTPM: 37.6
Samples: 2
Max nTPM: 41.1
Min nTPM: 34.1
RHH5243_R3615
41.1
RHH5272_R3644
34.1
Terminal effector memory CD8 T-cell nTPM: 53.4
Samples: 4
Max nTPM: 72.5
Min nTPM: 29.9
RHH5232_R3604
29.9
RHH5204_R3575
72.5
RHH5261_R3633
57.4
RHH5296_R3662
53.7
Vd2 gdTCR nTPM: 97.5
Samples: 4
Max nTPM: 156.3
Min nTPM: 56.7
RHH5234_R3606
56.7
RHH5206_R3577
156.3
RHH5263_R3635
85.4
RHH5298_R3664
91.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
