HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.6 nTPM
HPA Brain:41.8 nTPM
GTEx:14.6 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:5.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011090
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1911 Female, age 85, right hemisphere 35.5
2621 Female, age 67, right hemisphere 34.8
1898 Male, age 80, left hemisphere 33.5
1855 Male, age 76, left hemisphere 28.2
2148 Female, age 91, left hemisphere 27.9
2529 Female, age 94, left hemisphere 24.5
Dentate gyrus
nTPM: 31.3
2530 Female, age 94, left hemisphere 38.3
2528 Male, age 74, both hemispheres 34.0
2010 Male, age 76, both hemispheres 32.6
2246 Female, age 85, both hemispheres 29.3
2531 Female, age 67, both hemispheres 27.2
1927 Female, age 91, both hemispheres 26.3
Entorhinal gyrus
nTPM: 41.8
2117 Female, age 91, right hemisphere 51.8
2764 Male, age 80, right hemisphere 49.8
2686 Male, age 75, right hemisphere 42.2
2613 Female, age 94, left hemisphere 37.9
1787 Male, age 76, left hemisphere 35.0
1938 Female, age 85, left hemisphere 33.8
Hippocampus, CA1
nTPM: 27.4
2082 Female, age 91, right hemisphere 34.8
2527 Male, age 74, both hemispheres 29.7
1873 Female, age 85, both hemispheres 28.4
2749 Male, age 80, left hemisphere 23.6
2045 Male, age 76, both hemispheres 20.7
Hippocampus, CA2
nTPM: 34.3
1963 Male, age 80, left hemisphere 39.7
1940 Female, age 85, left hemisphere 39.5
2437 Female, age 94, left hemisphere 35.0
2249 Male, age 74, both hemispheres 33.4
2113 Female, age 91, right hemisphere 32.9
1892 Male, age 76, both hemispheres 25.2
Hippocampus, CA3
nTPM: 27.0
1891 Female, age 85, both hemispheres 43.0
1867 Male, age 76, both hemispheres 27.6
2620 Female, age 94, left hemisphere 26.5
2436 Male, age 74, both hemispheres 24.4
2861 Female, age 67, both hemispheres 23.7
2137 Male, age 80, left hemisphere 16.8
Parahippocampal cortex
nTPM: 33.6
2692 Male, age 74, both hemispheres 41.7
1990 Female, age 91, right hemisphere 38.8
2532 Female, age 72, left hemisphere 38.4
1850 Male, age 80, both hemispheres 37.7
2693 Female, age 94, both hemispheres 37.5
1933 Female, age 85, both hemispheres 33.4
2622 Female, age 67, right hemisphere 30.5
2018 Male, age 76, both hemispheres 28.8
2245 Female, age 91, both hemispheres 24.8
2250 Female, age 67, right hemisphere 24.3
Perirhinal gyrus
nTPM: 31.6
1794 Male, age 80, right hemisphere 38.1
1841 Female, age 85, right hemisphere 32.7
2848 Male, age 76, right hemisphere 32.3
1847 Female, age 91, left hemisphere 28.0
2521 Female, age 94, right hemisphere 26.8
Subiculum
nTPM: 41.1
2042 Male, age 76, both hemispheres 58.0
1901 Male, age 80, both hemispheres 46.8
1977 Female, age 85, both hemispheres 39.6
2619 Male, age 74, both hemispheres 39.4
2729 Female, age 91, right hemisphere 31.4
2438 Female, age 94, left hemisphere 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 42.6
Min nTPM: 5.0
Std nTPM: 6.3
Median nTPM: 12.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 32.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 32.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 32.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 31.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 30.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 29.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10153-102I9 76 years, female 16.8
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Subiculum
nTPM: 7.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.1
Sample A Female 9.6
Sample B Female 6.1
Sample C Male 6.8
Sample D Male 6.5
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.5
Sample A Female 10.7
Sample B Female 9.2
Sample C Male 6.5
Sample D Male 8.3
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.0
Sample A Female 11.1
Sample B Female 10.0
Sample C Male 9.0
Sample D Male 9.0
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.3
Sample A Female 8.3
Sample B Female 6.3
Sample C Male 10.7
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 7.1
Min nTPM: 3.7
Sample A Male 5.9
Sample B Male 7.1
Sample C Female 3.7
Sample D Female 5.0
Hippocampal formation
nTPM: 4.9
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.5
Sample A Male 4.6
Sample B Male 5.7
Sample C Female 4.5
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821915 Antisense, RP_060321_02_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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