HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.5 nTPM
HPA Brain:12.6 nTPM
GTEx:3.5 nTPM
FANTOM5:21.9 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:6.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030964
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
2529 Female, age 94, left hemisphere 12.3
2148 Female, age 91, left hemisphere 11.8
1898 Male, age 80, left hemisphere 11.6
1911 Female, age 85, right hemisphere 10.9
2621 Female, age 67, right hemisphere 10.9
1855 Male, age 76, left hemisphere 10.0
Dentate gyrus
nTPM: 10.9
2531 Female, age 67, both hemispheres 11.9
2246 Female, age 85, both hemispheres 11.3
1927 Female, age 91, both hemispheres 11.2
2528 Male, age 74, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.8
2010 Male, age 76, both hemispheres 9.2
Entorhinal gyrus
nTPM: 11.6
1938 Female, age 85, left hemisphere 13.2
2686 Male, age 75, right hemisphere 12.5
2117 Female, age 91, right hemisphere 12.1
2764 Male, age 80, right hemisphere 11.1
1787 Male, age 76, left hemisphere 10.4
2613 Female, age 94, left hemisphere 10.4
Hippocampus, CA1
nTPM: 10.6
1873 Female, age 85, both hemispheres 11.5
2527 Male, age 74, both hemispheres 10.8
2045 Male, age 76, both hemispheres 10.6
2082 Female, age 91, right hemisphere 10.6
2749 Male, age 80, left hemisphere 9.5
Hippocampus, CA2
nTPM: 11.1
2249 Male, age 74, both hemispheres 11.6
2437 Female, age 94, left hemisphere 11.3
1963 Male, age 80, left hemisphere 11.2
2113 Female, age 91, right hemisphere 11.1
1892 Male, age 76, both hemispheres 10.9
1940 Female, age 85, left hemisphere 10.5
Hippocampus, CA3
nTPM: 11.4
1891 Female, age 85, both hemispheres 12.8
1867 Male, age 76, both hemispheres 11.4
2137 Male, age 80, left hemisphere 11.1
2436 Male, age 74, both hemispheres 11.1
2620 Female, age 94, left hemisphere 11.1
2861 Female, age 67, both hemispheres 10.7
Parahippocampal cortex
nTPM: 11.8
1850 Male, age 80, both hemispheres 13.5
2693 Female, age 94, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.1
2622 Female, age 67, right hemisphere 11.9
2532 Female, age 72, left hemisphere 11.7
1990 Female, age 91, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.6
2692 Male, age 74, both hemispheres 11.6
2250 Female, age 67, right hemisphere 11.5
2018 Male, age 76, both hemispheres 9.7
Perirhinal gyrus
nTPM: 12.6
1841 Female, age 85, right hemisphere 13.5
2848 Male, age 76, right hemisphere 13.5
1794 Male, age 80, right hemisphere 12.6
1847 Female, age 91, left hemisphere 11.8
2521 Female, age 94, right hemisphere 11.4
Subiculum
nTPM: 12.2
2438 Female, age 94, left hemisphere 15.2
1977 Female, age 85, both hemispheres 12.3
1901 Male, age 80, both hemispheres 12.1
2619 Male, age 74, both hemispheres 11.5
2729 Female, age 91, right hemisphere 11.3
2042 Male, age 76, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.5
Samples: 197

Max nTPM: 7.6
Min nTPM: 2.2
Std nTPM: 0.9
Median nTPM: 3.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 7.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 6.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 6.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 5.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 5.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 5.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 5.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 5.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 5.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 5.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.9
FF:10153-102I9 76 years, female 22.0
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.4
Sample A Female 12.8
Sample B Female 11.7
Sample C Male 11.9
Sample D Male 11.4
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 13.3
Min nTPM: 12.4
Sample A Female 12.4
Sample B Female 13.1
Sample C Male 12.6
Sample D Male 13.3
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.1
Sample A Female 11.4
Sample B Female 12.9
Sample C Male 11.2
Sample D Male 11.1
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.4
Sample A Female 10.8
Sample B Female 11.6
Sample C Male 10.4
Sample D Male 12.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.9
Sample A Male 7.0
Sample B Male 5.9
Sample C Female 6.4
Sample D Female 8.3
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 7.0
Sample C Female 7.1
Sample D Female 6.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
70527945 Antisense, RP_050623_01_C03, Mouse strain C57BL/6J (56 days, male) 1.6

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