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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
262.8
nTPM
Monaco:
54.3
nTPM
Schmiedel:
90.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
262.8
HPA sample
nTPM
gdT-cell nTPM: 176.6
Samples: 6
Max nTPM: 213.8
Min nTPM: 124.8
P10809_1007
124.8
P10809_1022
180.5
P10809_1041
213.8
P10809_1060
160.3
P10809_1077
194.4
P10809_1098
185.8
MAIT T-cell nTPM: 165.0
Samples: 6
Max nTPM: 208.5
Min nTPM: 93.4
P10809_1006
93.4
P10809_1024
176.0
P10809_1043
184.6
P10809_1062
167.9
P10809_1083
159.7
P10809_1097
208.5
Memory CD4 T-cell nTPM: 182.0
Samples: 6
Max nTPM: 228.4
Min nTPM: 117.4
P10809_1014
117.4
P10809_1026
228.4
P10809_1045
185.3
P10809_1064
177.8
P10809_1086
201.2
P10809_1113
181.9
Memory CD8 T-cell nTPM: 169.3
Samples: 5
Max nTPM: 201.9
Min nTPM: 104.0
P10809_1012
104.0
P10809_1027
201.9
P10809_1046
199.1
P10809_1065
175.1
P10809_1111
166.3
Naive CD4 T-cell nTPM: 157.0
Samples: 6
Max nTPM: 220.8
Min nTPM: 81.0
P10809_1015
81.0
P10809_1030
220.8
P10809_1049
197.6
P10809_1068
137.2
P10809_1085
157.8
P10809_1112
147.3
Naive CD8 T-cell nTPM: 153.5
Samples: 6
Max nTPM: 196.6
Min nTPM: 83.9
P10809_1016
83.9
P10809_1031
196.6
P10809_1050
149.1
P10809_1069
172.2
P10809_1087
180.5
P10809_1110
138.7
T-reg nTPM: 262.9
Samples: 6
Max nTPM: 365.5
Min nTPM: 152.5
P10809_1018
152.5
P10809_1037
252.4
P10809_1056
365.5
P10809_1075
280.2
P10809_1094
277.2
P10809_1106
249.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.2
Samples: 4
Max nTPM: 49.4
Min nTPM: 31.1
RHH5202_R3573
31.1
RHH5230_R3602
46.0
RHH5259_R3631
49.4
RHH5288_R3660
38.3
Effector memory CD8 T-cell nTPM: 33.8
Samples: 4
Max nTPM: 41.3
Min nTPM: 19.4
RHH5203_R3574
36.8
RHH5231_R3603
19.4
RHH5260_R3632
41.3
RHH5289_R3661
37.5
MAIT T-cell nTPM: 37.0
Samples: 4
Max nTPM: 48.0
Min nTPM: 27.3
RHH5233_R3605
34.0
RHH5205_R3576
27.3
RHH5262_R3634
48.0
RHH5297_R3663
38.8
Memory CD4 T-cell TFH nTPM: 41.4
Samples: 4
Max nTPM: 58.0
Min nTPM: 21.9
RHH5300_R3666
42.9
RHH5236_R3608
58.0
RHH5265_R3637
42.9
RHH5208_R3579
21.9
Memory CD4 T-cell Th1 nTPM: 43.0
Samples: 4
Max nTPM: 53.4
Min nTPM: 29.8
RHH5210_R3581
29.8
RHH5302_R3668
53.4
RHH5238_R3610
38.3
RHH5267_R3639
50.4
Memory CD4 T-cell Th1/Th17 nTPM: 50.9
Samples: 4
Max nTPM: 69.4
Min nTPM: 39.9
RHH5303_R3669
69.4
RHH5211_R3582
45.2
RHH5239_R3611
39.9
RHH5268_R3640
49.2
Memory CD4 T-cell Th17 nTPM: 47.5
Samples: 4
Max nTPM: 48.5
Min nTPM: 45.1
RHH5304_R3670
48.5
RHH5212_R3583
45.1
RHH5240_R3612
48.0
RHH5269_R3641
48.3
Memory CD4 T-cell Th2 nTPM: 47.2
Samples: 4
Max nTPM: 56.2
Min nTPM: 36.9
RHH5305_R3671
50.9
RHH5213_R3584
56.2
RHH5241_R3613
44.8
RHH5270_R3642
36.9
Naive CD4 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 66.4
Min nTPM: 35.7
RHH5306_R3672
66.4
RHH5214_R3585
52.2
RHH5242_R3614
39.8
RHH5271_R3643
35.7
Naive CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 46.0
Min nTPM: 20.8
RHH5201_R3572
36.7
RHH5229_R3601
20.8
RHH5258_R3630
46.0
RHH5287_R3659
45.5
Non-Vd2 gdTCR nTPM: 53.0
Samples: 4
Max nTPM: 78.8
Min nTPM: 31.2
RHH5235_R3607
31.2
RHH5264_R3636
68.2
RHH5207_R3578
33.9
RHH5299_R3665
78.8
T-reg nTPM: 51.1
Samples: 4
Max nTPM: 64.3
Min nTPM: 43.3
RHH5301_R3667
52.8
RHH5237_R3609
43.9
RHH5266_R3638
64.3
RHH5209_R3580
43.3
Terminal effector memory CD4 T-cell nTPM: 39.7
Samples: 2
Max nTPM: 40.0
Min nTPM: 39.4
RHH5243_R3615
39.4
RHH5272_R3644
40.0
Terminal effector memory CD8 T-cell nTPM: 53.6
Samples: 4
Max nTPM: 67.1
Min nTPM: 38.5
RHH5232_R3604
38.5
RHH5204_R3575
52.4
RHH5261_R3633
56.2
RHH5296_R3662
67.1
Vd2 gdTCR nTPM: 54.3
Samples: 4
Max nTPM: 66.8
Min nTPM: 39.7
RHH5234_R3606
39.7
RHH5206_R3577
66.8
RHH5263_R3635
52.9
RHH5298_R3664
57.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
