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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
249.5
nTPM
Monaco:
58.6
nTPM
Schmiedel:
131.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
249.5
HPA sample
nTPM
gdT-cell nTPM: 181.0
Samples: 6
Max nTPM: 237.5
Min nTPM: 143.0
P10809_1007
158.5
P10809_1022
237.5
P10809_1041
143.0
P10809_1060
149.1
P10809_1077
181.6
P10809_1098
216.3
MAIT T-cell nTPM: 172.1
Samples: 6
Max nTPM: 237.4
Min nTPM: 119.8
P10809_1006
119.8
P10809_1024
171.1
P10809_1043
140.4
P10809_1062
170.1
P10809_1083
193.7
P10809_1097
237.4
Memory CD4 T-cell nTPM: 136.6
Samples: 6
Max nTPM: 173.1
Min nTPM: 77.9
P10809_1014
99.6
P10809_1026
173.1
P10809_1045
77.9
P10809_1064
143.1
P10809_1086
161.6
P10809_1113
164.1
Memory CD8 T-cell nTPM: 135.2
Samples: 5
Max nTPM: 162.8
Min nTPM: 119.3
P10809_1012
125.7
P10809_1027
119.9
P10809_1046
119.3
P10809_1065
162.8
P10809_1111
148.4
Naive CD4 T-cell nTPM: 102.7
Samples: 6
Max nTPM: 129.7
Min nTPM: 69.6
P10809_1015
69.6
P10809_1030
118.4
P10809_1049
91.4
P10809_1068
89.2
P10809_1085
129.7
P10809_1112
118.1
Naive CD8 T-cell nTPM: 125.6
Samples: 6
Max nTPM: 161.0
Min nTPM: 86.4
P10809_1016
110.9
P10809_1031
139.4
P10809_1050
86.4
P10809_1069
130.1
P10809_1087
161.0
P10809_1110
125.7
T-reg nTPM: 249.6
Samples: 6
Max nTPM: 437.3
Min nTPM: 154.5
P10809_1018
175.3
P10809_1037
209.2
P10809_1056
154.5
P10809_1075
275.1
P10809_1094
437.3
P10809_1106
245.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.5
Samples: 4
Max nTPM: 40.8
Min nTPM: 21.4
RHH5202_R3573
22.0
RHH5230_R3602
21.4
RHH5259_R3631
40.8
RHH5288_R3660
33.9
Effector memory CD8 T-cell nTPM: 23.0
Samples: 4
Max nTPM: 30.6
Min nTPM: 17.3
RHH5203_R3574
30.6
RHH5231_R3603
17.3
RHH5260_R3632
26.6
RHH5289_R3661
17.5
MAIT T-cell nTPM: 34.3
Samples: 4
Max nTPM: 39.9
Min nTPM: 28.3
RHH5233_R3605
28.3
RHH5205_R3576
33.0
RHH5262_R3634
39.9
RHH5297_R3663
35.9
Memory CD4 T-cell TFH nTPM: 27.4
Samples: 4
Max nTPM: 48.0
Min nTPM: 12.5
RHH5300_R3666
23.1
RHH5236_R3608
48.0
RHH5265_R3637
26.0
RHH5208_R3579
12.5
Memory CD4 T-cell Th1 nTPM: 38.9
Samples: 4
Max nTPM: 52.9
Min nTPM: 12.2
RHH5210_R3581
12.2
RHH5302_R3668
51.0
RHH5238_R3610
52.9
RHH5267_R3639
39.3
Memory CD4 T-cell Th1/Th17 nTPM: 30.4
Samples: 4
Max nTPM: 39.1
Min nTPM: 26.0
RHH5303_R3669
39.1
RHH5211_R3582
26.0
RHH5239_R3611
28.1
RHH5268_R3640
28.2
Memory CD4 T-cell Th17 nTPM: 20.0
Samples: 4
Max nTPM: 27.9
Min nTPM: 14.0
RHH5304_R3670
27.9
RHH5212_R3583
17.1
RHH5240_R3612
21.1
RHH5269_R3641
14.0
Memory CD4 T-cell Th2 nTPM: 27.6
Samples: 4
Max nTPM: 37.6
Min nTPM: 20.5
RHH5305_R3671
37.6
RHH5213_R3584
25.7
RHH5241_R3613
20.5
RHH5270_R3642
26.7
Naive CD4 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 37.4
Min nTPM: 22.3
RHH5306_R3672
28.9
RHH5214_R3585
37.4
RHH5242_R3614
25.7
RHH5271_R3643
22.3
Naive CD8 T-cell nTPM: 23.6
Samples: 4
Max nTPM: 30.3
Min nTPM: 12.9
RHH5201_R3572
12.9
RHH5229_R3601
30.3
RHH5258_R3630
22.6
RHH5287_R3659
28.5
Non-Vd2 gdTCR nTPM: 38.4
Samples: 4
Max nTPM: 51.3
Min nTPM: 23.4
RHH5235_R3607
36.0
RHH5264_R3636
43.0
RHH5207_R3578
23.4
RHH5299_R3665
51.3
T-reg nTPM: 34.7
Samples: 4
Max nTPM: 42.7
Min nTPM: 24.2
RHH5301_R3667
42.7
RHH5237_R3609
42.6
RHH5266_R3638
29.3
RHH5209_R3580
24.2
Terminal effector memory CD4 T-cell nTPM: 18.5
Samples: 2
Max nTPM: 22.6
Min nTPM: 14.3
RHH5243_R3615
22.6
RHH5272_R3644
14.3
Terminal effector memory CD8 T-cell nTPM: 46.9
Samples: 4
Max nTPM: 91.6
Min nTPM: 27.5
RHH5232_R3604
32.3
RHH5204_R3575
91.6
RHH5261_R3633
36.0
RHH5296_R3662
27.5
Vd2 gdTCR nTPM: 58.6
Samples: 4
Max nTPM: 86.0
Min nTPM: 33.2
RHH5234_R3606
33.2
RHH5206_R3577
86.0
RHH5263_R3635
40.8
RHH5298_R3664
74.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
