HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:326.9 nTPM
HPA Brain:206.4 nTPM
GTEx:326.9 nTPM
FANTOM5:72.2 Scaled Tags Per Million
Pig:135.0 nTPM
Mouse:58.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042575
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 206.4
Sample id Sample description nTPM
Hippocampus
nTPM: 206.4
1898 Male, age 80, left hemisphere 232.9
2621 Female, age 67, right hemisphere 216.7
2148 Female, age 91, left hemisphere 206.1
1911 Female, age 85, right hemisphere 199.8
2529 Female, age 94, left hemisphere 191.6
1855 Male, age 76, left hemisphere 191.5
Dentate gyrus
nTPM: 160.5
2531 Female, age 67, both hemispheres 190.8
2528 Male, age 74, both hemispheres 170.8
2246 Female, age 85, both hemispheres 163.4
1927 Female, age 91, both hemispheres 157.7
2010 Male, age 76, both hemispheres 142.2
2530 Female, age 94, left hemisphere 137.8
Entorhinal gyrus
nTPM: 179.0
1938 Female, age 85, left hemisphere 198.6
2764 Male, age 80, right hemisphere 192.1
2686 Male, age 75, right hemisphere 189.2
2117 Female, age 91, right hemisphere 187.6
1787 Male, age 76, left hemisphere 161.5
2613 Female, age 94, left hemisphere 145.2
Hippocampus, CA1
nTPM: 162.8
2527 Male, age 74, both hemispheres 191.0
1873 Female, age 85, both hemispheres 188.3
2082 Female, age 91, right hemisphere 171.3
2045 Male, age 76, both hemispheres 151.7
2749 Male, age 80, left hemisphere 111.9
Hippocampus, CA2
nTPM: 156.2
1963 Male, age 80, left hemisphere 186.3
2113 Female, age 91, right hemisphere 181.3
2437 Female, age 94, left hemisphere 151.1
1940 Female, age 85, left hemisphere 146.5
1892 Male, age 76, both hemispheres 142.3
2249 Male, age 74, both hemispheres 129.4
Hippocampus, CA3
nTPM: 176.7
2861 Female, age 67, both hemispheres 350.7
1891 Female, age 85, both hemispheres 191.7
1867 Male, age 76, both hemispheres 155.6
2620 Female, age 94, left hemisphere 146.7
2137 Male, age 80, left hemisphere 108.0
2436 Male, age 74, both hemispheres 107.2
Parahippocampal cortex
nTPM: 179.6
2622 Female, age 67, right hemisphere 250.8
2692 Male, age 74, both hemispheres 210.5
1933 Female, age 85, both hemispheres 193.8
2532 Female, age 72, left hemisphere 178.6
2245 Female, age 91, both hemispheres 178.5
2018 Male, age 76, both hemispheres 163.7
1850 Male, age 80, both hemispheres 160.5
2250 Female, age 67, right hemisphere 158.5
2693 Female, age 94, both hemispheres 158.2
1990 Female, age 91, right hemisphere 142.5
Perirhinal gyrus
nTPM: 156.2
1847 Female, age 91, left hemisphere 180.0
1794 Male, age 80, right hemisphere 174.2
1841 Female, age 85, right hemisphere 155.7
2521 Female, age 94, right hemisphere 139.7
2848 Male, age 76, right hemisphere 131.4
Subiculum
nTPM: 170.0
2619 Male, age 74, both hemispheres 228.4
2729 Female, age 91, right hemisphere 208.2
1977 Female, age 85, both hemispheres 162.2
1901 Male, age 80, both hemispheres 147.5
2042 Male, age 76, both hemispheres 147.4
2438 Female, age 94, left hemisphere 126.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 326.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 326.9
Samples: 197

Max nTPM: 1150.0
Min nTPM: 26.3
Std nTPM: 164.4
Median nTPM: 300.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1150.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1008.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 850.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 761.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 751.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 725.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 724.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 714.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 670.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 666.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 655.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.2
FF:10153-102I9 76 years, female 94.5
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 135.0
Pig sample Sample description nTPM
Subiculum
nTPM: 123.2
Samples: 4

Max nTPM: 153.4
Min nTPM: 111.6
Sample A Female 153.4
Sample B Female 114.1
Sample C Male 111.6
Sample D Male 113.6
Dorsal hippocampus
nTPM: 113.7
Samples: 4

Max nTPM: 140.1
Min nTPM: 87.1
Sample A Female 133.2
Sample B Female 94.5
Sample C Male 140.1
Sample D Male 87.1
Entorhinal cortex
nTPM: 135.1
Samples: 4

Max nTPM: 179.2
Min nTPM: 111.3
Sample A Female 117.8
Sample B Female 131.9
Sample C Male 179.2
Sample D Male 111.3
Ventral hippocampus
nTPM: 115.7
Samples: 4

Max nTPM: 158.3
Min nTPM: 96.1
Sample A Female 103.1
Sample B Female 96.1
Sample C Male 158.3
Sample D Male 105.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 60.8
Min nTPM: 54.2
Sample A Male 59.1
Sample B Male 59.8
Sample C Female 60.8
Sample D Female 54.2
Hippocampal formation
nTPM: 56.3
Samples: 4

Max nTPM: 72.5
Min nTPM: 48.2
Sample A Male 52.3
Sample B Male 52.1
Sample C Female 48.2
Sample D Female 72.5

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