HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:719.3 nTPM
HPA Brain:221.9 nTPM
GTEx:719.3 nTPM
FANTOM5:233.1 Scaled Tags Per Million
Pig:40.3 nTPM
Mouse:490.3 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035010
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 221.9
Sample id Sample description nTPM
Hippocampus
nTPM: 221.1
1898 Male, age 80, left hemisphere 262.4
2529 Female, age 94, left hemisphere 249.4
2621 Female, age 67, right hemisphere 219.4
1855 Male, age 76, left hemisphere 211.5
1911 Female, age 85, right hemisphere 204.6
2148 Female, age 91, left hemisphere 179.4
Dentate gyrus
nTPM: 209.0
2530 Female, age 94, left hemisphere 341.8
2010 Male, age 76, both hemispheres 238.0
1927 Female, age 91, both hemispheres 198.3
2246 Female, age 85, both hemispheres 183.8
2531 Female, age 67, both hemispheres 163.5
2528 Male, age 74, both hemispheres 128.5
Entorhinal gyrus
nTPM: 204.1
2686 Male, age 75, right hemisphere 238.6
1787 Male, age 76, left hemisphere 209.0
2117 Female, age 91, right hemisphere 205.8
2764 Male, age 80, right hemisphere 203.7
1938 Female, age 85, left hemisphere 199.6
2613 Female, age 94, left hemisphere 167.6
Hippocampus, CA1
nTPM: 221.9
2749 Male, age 80, left hemisphere 290.6
1873 Female, age 85, both hemispheres 258.9
2527 Male, age 74, both hemispheres 236.6
2045 Male, age 76, both hemispheres 175.1
2082 Female, age 91, right hemisphere 148.4
Hippocampus, CA2
nTPM: 217.5
1892 Male, age 76, both hemispheres 289.1
1963 Male, age 80, left hemisphere 260.0
2437 Female, age 94, left hemisphere 235.2
1940 Female, age 85, left hemisphere 213.8
2249 Male, age 74, both hemispheres 160.9
2113 Female, age 91, right hemisphere 146.1
Hippocampus, CA3
nTPM: 185.3
2137 Male, age 80, left hemisphere 223.5
1867 Male, age 76, both hemispheres 221.4
1891 Female, age 85, both hemispheres 218.4
2436 Male, age 74, both hemispheres 164.7
2861 Female, age 67, both hemispheres 151.2
2620 Female, age 94, left hemisphere 132.5
Parahippocampal cortex
nTPM: 192.0
2245 Female, age 91, both hemispheres 233.8
1850 Male, age 80, both hemispheres 230.1
1933 Female, age 85, both hemispheres 228.8
2532 Female, age 72, left hemisphere 205.6
2018 Male, age 76, both hemispheres 200.7
2250 Female, age 67, right hemisphere 187.0
1990 Female, age 91, right hemisphere 183.0
2692 Male, age 74, both hemispheres 182.4
2622 Female, age 67, right hemisphere 142.8
2693 Female, age 94, both hemispheres 126.0
Perirhinal gyrus
nTPM: 187.5
1847 Female, age 91, left hemisphere 222.4
1794 Male, age 80, right hemisphere 208.3
1841 Female, age 85, right hemisphere 188.0
2848 Male, age 76, right hemisphere 167.2
2521 Female, age 94, right hemisphere 151.7
Subiculum
nTPM: 216.7
1901 Male, age 80, both hemispheres 292.6
2042 Male, age 76, both hemispheres 259.4
2438 Female, age 94, left hemisphere 218.3
1977 Female, age 85, both hemispheres 216.5
2619 Male, age 74, both hemispheres 186.9
2729 Female, age 91, right hemisphere 126.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 719.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 719.3
Samples: 197

Max nTPM: 1857.0
Min nTPM: 283.3
Std nTPM: 227.6
Median nTPM: 675.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1857.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1530.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1417.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1391.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1351.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1342.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1256.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1222.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1219.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1190.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 1166.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 233.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 233.1
FF:10169-103B7 60 years, female 307.4
FF:10153-102I9 76 years, female 158.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.3
Pig sample Sample description nTPM
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 48.5
Min nTPM: 28.2
Sample A Female 48.5
Sample B Female 32.0
Sample C Male 28.2
Sample D Male 31.8
Dorsal hippocampus
nTPM: 37.1
Samples: 4

Max nTPM: 46.2
Min nTPM: 27.0
Sample A Female 46.2
Sample B Female 30.1
Sample C Male 44.9
Sample D Male 27.0
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 47.5
Min nTPM: 33.8
Sample A Female 39.1
Sample B Female 47.5
Sample C Male 40.7
Sample D Male 33.8
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 35.5
Min nTPM: 25.9
Sample A Female 35.5
Sample B Female 25.9
Sample C Male 33.7
Sample D Male 33.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 490.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 457.2
Samples: 4

Max nTPM: 526.0
Min nTPM: 427.8
Sample A Male 431.4
Sample B Male 427.8
Sample C Female 526.0
Sample D Female 443.6
Hippocampal formation
nTPM: 490.3
Samples: 4

Max nTPM: 601.1
Min nTPM: 424.7
Sample A Male 601.1
Sample B Male 475.4
Sample C Female 424.7
Sample D Female 459.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
74426449 Antisense, RP_051121_02_B10, Mouse strain C57BL/6J (56 days, male) 2.2

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