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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
306.6
nTPM
FANTOM5:
258.6
Scaled Tags Per Million
Pig:
55.3
nTPM
Allen mouse:
2.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
306.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 256.5
2188
Female, age 91, both hemispheres
327.3
2090
Male, age 80, both hemispheres
263.1
2301
Female, age 85, both hemispheres
221.6
1984
Male, age 76, both hemispheres
214.1
Dorsal cochlear nucleus nTPM: 246.1
2802
Male, age 74, right hemisphere
332.7
2187
Female, age 91, both hemispheres
312.4
2378
Male, age 80, both hemispheres
206.6
2370
Male, age 61, both hemispheres
205.8
2058
Male, age 76, both hemispheres
173.0
Dorsal tegmental nucleus nTPM: 267.3
2083
Male, age 80, both hemispheres
302.0
2326
Male, age 74, both hemispheres
274.8
2358
Male, age 61, both hemispheres
259.4
1936
Male, age 76, left hemisphere
233.1
Dorsolateral tegmental area nTPM: 231.4
2751
Female, age 85, both hemispheres
286.1
2654
Male, age 80, both hemispheres
261.1
2337
Male, age 61, both hemispheres
232.3
2141
Male, age 76, both hemispheres
221.5
2360
Male, age 74, both hemispheres
155.8
Kolliker-Fuse nucleus nTPM: 264.9
2793
Female, age 91, left hemisphere
327.0
2163
Male, age 80, both hemispheres
274.4
2315
Male, age 76, right hemisphere
193.3
Lateral lemniscal nuclei nTPM: 232.5
2453
Male, age 74, right hemisphere
307.3
2169
Male, age 76, both hemispheres
298.2
2746
Female, age 85, left hemisphere
216.1
2320
Female, age 91, left hemisphere
206.9
2036
Male, age 80, both hemispheres
134.0
Lateral parabrachial nucleus nTPM: 241.4
2139
Female, age 85, right hemisphere
271.8
2792
Male, age 76, both hemispheres
263.4
2013
Male, age 80, both hemispheres
249.0
2790
Male, age 61, both hemispheres
181.5
Lateral vestibular nucleus nTPM: 264.6
2311
Male, age 80, both hemispheres
268.4
2184
Male, age 76, both hemispheres
260.7
Locus coeruleus nTPM: 237.5
2720
Male, age 74, both hemispheres
299.3
2123
Female, age 91, both hemispheres
273.1
2014
Male, age 55, unknown
250.9
2162
Male, age 80, both hemispheres
221.6
1980
Male, age 76, both hemispheres
211.3
2788
Male, age 74, unknown
209.1
2317
Female, age 72, unknown
197.6
Medial parabrachial nucleus nTPM: 273.4
2170
Female, age 91, both hemispheres
357.0
2854
Male, age 80, both hemispheres
331.3
2786
Male, age 76, both hemispheres
233.2
2156
Male, age 61, both hemispheres
232.6
2463
Female, age 85, right hemisphere
213.1
Medial periolivary nuclei nTPM: 237.4
2171
Female, age 85, both hemispheres
272.5
2063
Male, age 76, both hemispheres
259.7
2458
Female, age 91, both hemispheres
235.3
2081
Male, age 80, both hemispheres
213.3
2791
Male, age 74, right hemisphere
206.0
Motor facial nucleus nTPM: 262.3
2697
Female, age 85, both hemispheres
334.2
2365
Male, age 74, right hemisphere
311.4
2062
Male, age 76, both hemispheres
251.2
2795
Female, age 91, both hemispheres
239.8
2126
Male, age 61, both hemispheres
228.8
2327
Male, age 80, both hemispheres
208.5
Motor trigeminal nucleus nTPM: 230.7
2335
Male, age 61, both hemispheres
266.9
2560
Male, age 74, both hemispheres
227.4
2309
Male, age 76, both hemispheres
222.6
2321
Female, age 91, both hemispheres
218.9
2079
Male, age 80, both hemispheres
217.9
Nuclei of the trapezoid body nTPM: 239.6
1983
Male, age 76, both hemispheres
296.2
2159
Male, age 61, both hemispheres
289.2
2166
Male, age 80, both hemispheres
229.8
2735
Female, age 85, both hemispheres
215.8
2368
Female, age 91, both hemispheres
166.8
Nucleus raphe magnus nTPM: 271.8
2051
Male, age 76, both hemispheres
305.4
2172
Female, age 85, both hemispheres
303.2
2160
Male, age 61, both hemispheres
289.8
2455
Male, age 74, both hemispheres
277.6
2328
Male, age 80, both hemispheres
262.2
2459
Female, age 91, both hemispheres
193.0
Paramedian reticular nucleus nTPM: 303.7
2050
Female, age 85, both hemispheres
413.3
2052
Male, age 76, both hemispheres
308.1
2313
Male, age 61, both hemispheres
253.0
2057
Male, age 80, both hemispheres
240.5
Pedunculopontine tegmental nucleus nTPM: 271.6
2338
Male, age 61, both hemispheres
306.2
2334
Male, age 80, both hemispheres
257.7
1921
Female, age 85, both hemispheres
250.8
Pontine nuclei nTPM: 269.0
1863
Male, age 55, unknown
373.8
2787
Female, age 85, both hemispheres
314.4
2454
Male, age 74, left hemisphere
284.1
1968
Male, age 76, left hemisphere
265.5
2109
Female, age 72, unknown
258.6
2319
Female, age 91, both hemispheres
248.6
2727
Male, age 61, right hemisphere
212.6
2115
Male, age 80, left hemisphere
194.5
Pontine raphe nucleus nTPM: 221.3
2122
Female, age 85, midline
231.3
2853
Male, age 76, midline
211.4
Posteroventral cochlear nucleus nTPM: 255.1
2341
Male, age 80, both hemispheres
333.3
2135
Female, age 91, both hemispheres
259.9
2070
Male, age 76, both hemispheres
245.4
2752
Female, age 85, both hemispheres
235.2
2371
Male, age 61, both hemispheres
202.0
Principal sensory trigeminal nucleus nTPM: 250.9
2367
Female, age 91, left hemisphere
290.7
2324
Male, age 76, both hemispheres
242.1
2158
Male, age 61, both hemispheres
239.3
2008
Male, age 80, left hemisphere
231.5
Reticular pontine nucleus, caudal nTPM: 282.5
2559
Male, age 74, both hemispheres
300.6
2092
Male, age 76, both hemispheres
297.7
2457
Female, age 91, both hemispheres
297.3
2332
Male, age 80, right hemisphere
234.5
Reticular pontine nucleus, oral nTPM: 306.6
2366
Female, age 91, both hemispheres
351.3
1939
Male, age 80, both hemispheres
329.5
2361
Male, age 74, both hemispheres
319.6
2167
Male, age 76, both hemispheres
276.8
2012
Female, age 85, both hemispheres
255.6
Reticulotegmental nucleus nTPM: 264.2
2322
Female, age 91, both hemispheres
302.6
2452
Male, age 74, both hemispheres
266.3
2333
Male, age 80, both hemispheres
258.9
2325
Male, age 76, both hemispheres
229.0
Spinal trigeminal nucleus, oral nTPM: 241.3
2164
Male, age 80, both hemispheres
309.1
2737
Female, age 85, both hemispheres
218.0
1978
Male, age 76, both hemispheres
196.8
Subcoeruleus area nTPM: 251.8
1958
Male, age 80, both hemispheres
321.4
2369
Female, age 85, left hemisphere
260.7
2323
Female, age 91, left hemisphere
256.0
2451
Male, age 74, both hemispheres
213.4
2089
Male, age 76, left hemisphere
207.6
Superior olive nTPM: 245.9
2020
Male, age 76, both hemispheres
279.8
1875
Female, age 85, both hemispheres
257.8
2561
Female, age 91, both hemispheres
243.2
2364
Male, age 74, right hemisphere
227.3
2329
Male, age 80, right hemisphere
221.1
Ventral periolivary nuclei nTPM: 238.0
2165
Male, age 80, both hemispheres
309.0
2023
Male, age 76, both hemispheres
235.3
2130
Female, age 85, both hemispheres
206.2
2794
Female, age 91, left hemisphere
201.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 259.7
2840
Female, age 85, both hemispheres
334.5
1959
Male, age 76, both hemispheres
315.8
2449
Male, age 74, both hemispheres
277.7
2161
Male, age 80, both hemispheres
235.5
2359
Male, age 61, both hemispheres
211.3
2456
Female, age 91, both hemispheres
183.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.3
Pig sample
Sample description
nTPM
Pons nTPM: 55.4
Samples: 4
Max nTPM: 66.3
Min nTPM: 38.5
Sample A
Female
50.7
Sample B
Female
38.5
Sample C
Male
65.9
Sample D
Male
66.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.