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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1090.8
nTPM
Monaco:
75.9
nTPM
Schmiedel:
91.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1090.8
HPA sample
nTPM
gdT-cell nTPM: 745.2
Samples: 6
Max nTPM: 1076.3
Min nTPM: 554.8
P10809_1007
554.8
P10809_1022
627.4
P10809_1041
1076.3
P10809_1060
704.1
P10809_1077
783.5
P10809_1098
725.0
MAIT T-cell nTPM: 778.9
Samples: 6
Max nTPM: 947.4
Min nTPM: 407.3
P10809_1006
407.3
P10809_1024
843.9
P10809_1043
947.4
P10809_1062
822.9
P10809_1083
776.8
P10809_1097
875.1
Memory CD4 T-cell nTPM: 913.0
Samples: 6
Max nTPM: 1117.2
Min nTPM: 518.2
P10809_1014
518.2
P10809_1026
1117.2
P10809_1045
1051.5
P10809_1064
995.1
P10809_1086
894.1
P10809_1113
902.0
Memory CD8 T-cell nTPM: 840.1
Samples: 5
Max nTPM: 1019.9
Min nTPM: 427.1
P10809_1012
427.1
P10809_1027
1019.9
P10809_1046
953.6
P10809_1065
992.0
P10809_1111
807.7
Naive CD4 T-cell nTPM: 840.9
Samples: 6
Max nTPM: 1425.0
Min nTPM: 381.0
P10809_1015
381.0
P10809_1030
1011.2
P10809_1049
1425.0
P10809_1068
788.3
P10809_1085
698.6
P10809_1112
741.4
Naive CD8 T-cell nTPM: 815.2
Samples: 6
Max nTPM: 1001.8
Min nTPM: 481.7
P10809_1016
481.7
P10809_1031
853.0
P10809_1050
977.6
P10809_1069
1001.8
P10809_1087
913.9
P10809_1110
663.1
T-reg nTPM: 1090.8
Samples: 6
Max nTPM: 1736.7
Min nTPM: 506.6
P10809_1018
506.6
P10809_1037
1096.1
P10809_1056
1736.7
P10809_1075
1147.2
P10809_1094
1074.7
P10809_1106
983.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.4
Samples: 4
Max nTPM: 95.2
Min nTPM: 14.9
RHH5202_R3573
14.9
RHH5230_R3602
67.5
RHH5259_R3631
95.2
RHH5288_R3660
24.0
Effector memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 92.6
Min nTPM: 38.0
RHH5203_R3574
38.0
RHH5231_R3603
41.7
RHH5260_R3632
92.6
RHH5289_R3661
44.2
MAIT T-cell nTPM: 35.2
Samples: 4
Max nTPM: 51.5
Min nTPM: 13.0
RHH5233_R3605
13.0
RHH5205_R3576
33.9
RHH5262_R3634
51.5
RHH5297_R3663
42.2
Memory CD4 T-cell TFH nTPM: 30.9
Samples: 4
Max nTPM: 53.2
Min nTPM: 12.3
RHH5300_R3666
17.9
RHH5236_R3608
53.2
RHH5265_R3637
40.3
RHH5208_R3579
12.3
Memory CD4 T-cell Th1 nTPM: 60.1
Samples: 4
Max nTPM: 112.2
Min nTPM: 14.5
RHH5210_R3581
14.5
RHH5302_R3668
53.5
RHH5238_R3610
112.2
RHH5267_R3639
60.1
Memory CD4 T-cell Th1/Th17 nTPM: 46.4
Samples: 4
Max nTPM: 75.7
Min nTPM: 28.8
RHH5303_R3669
28.8
RHH5211_R3582
30.8
RHH5239_R3611
50.2
RHH5268_R3640
75.7
Memory CD4 T-cell Th17 nTPM: 49.3
Samples: 4
Max nTPM: 63.2
Min nTPM: 23.9
RHH5304_R3670
57.4
RHH5212_R3583
23.9
RHH5240_R3612
63.2
RHH5269_R3641
52.5
Memory CD4 T-cell Th2 nTPM: 58.0
Samples: 4
Max nTPM: 83.7
Min nTPM: 26.0
RHH5305_R3671
83.7
RHH5213_R3584
44.6
RHH5241_R3613
26.0
RHH5270_R3642
77.8
Naive CD4 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 44.3
Min nTPM: 22.4
RHH5306_R3672
44.3
RHH5214_R3585
32.3
RHH5242_R3614
22.4
RHH5271_R3643
44.3
Naive CD8 T-cell nTPM: 51.4
Samples: 4
Max nTPM: 90.0
Min nTPM: 37.0
RHH5201_R3572
37.0
RHH5229_R3601
90.0
RHH5258_R3630
38.6
RHH5287_R3659
40.0
Non-Vd2 gdTCR nTPM: 47.3
Samples: 4
Max nTPM: 54.2
Min nTPM: 39.0
RHH5235_R3607
52.0
RHH5264_R3636
54.2
RHH5207_R3578
44.0
RHH5299_R3665
39.0
T-reg nTPM: 45.2
Samples: 4
Max nTPM: 64.9
Min nTPM: 24.3
RHH5301_R3667
42.7
RHH5237_R3609
24.3
RHH5266_R3638
48.9
RHH5209_R3580
64.9
Terminal effector memory CD4 T-cell nTPM: 34.8
Samples: 2
Max nTPM: 36.5
Min nTPM: 33.0
RHH5243_R3615
36.5
RHH5272_R3644
33.0
Terminal effector memory CD8 T-cell nTPM: 57.2
Samples: 4
Max nTPM: 111.9
Min nTPM: 28.6
RHH5232_R3604
28.6
RHH5204_R3575
47.4
RHH5261_R3633
111.9
RHH5296_R3662
40.7
Vd2 gdTCR nTPM: 75.9
Samples: 4
Max nTPM: 140.0
Min nTPM: 28.3
RHH5234_R3606
28.3
RHH5206_R3577
140.0
RHH5263_R3635
92.5
RHH5298_R3664
42.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
