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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.3
nTPM
Monaco:
277.7
nTPM
Schmiedel:
1360.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.3
HPA sample
nTPM
gdT-cell nTPM: 63.3
Samples: 6
Max nTPM: 81.6
Min nTPM: 49.2
P10809_1007
49.2
P10809_1022
55.4
P10809_1041
71.5
P10809_1060
63.1
P10809_1077
58.8
P10809_1098
81.6
MAIT T-cell nTPM: 83.4
Samples: 6
Max nTPM: 116.9
Min nTPM: 66.8
P10809_1006
75.3
P10809_1024
89.7
P10809_1043
66.8
P10809_1062
81.7
P10809_1083
70.1
P10809_1097
116.9
Memory CD4 T-cell nTPM: 66.4
Samples: 6
Max nTPM: 94.4
Min nTPM: 54.4
P10809_1014
67.1
P10809_1026
64.4
P10809_1045
56.6
P10809_1064
61.7
P10809_1086
54.4
P10809_1113
94.4
Memory CD8 T-cell nTPM: 67.9
Samples: 5
Max nTPM: 101.7
Min nTPM: 45.6
P10809_1012
73.1
P10809_1027
62.7
P10809_1046
45.6
P10809_1065
56.5
P10809_1111
101.7
Naive CD4 T-cell nTPM: 83.2
Samples: 6
Max nTPM: 113.1
Min nTPM: 44.4
P10809_1015
98.1
P10809_1030
84.9
P10809_1049
44.4
P10809_1068
84.3
P10809_1085
74.4
P10809_1112
113.1
Naive CD8 T-cell nTPM: 88.3
Samples: 6
Max nTPM: 109.1
Min nTPM: 67.1
P10809_1016
98.2
P10809_1031
99.1
P10809_1050
75.0
P10809_1069
81.3
P10809_1087
67.1
P10809_1110
109.1
T-reg nTPM: 83.0
Samples: 6
Max nTPM: 134.2
Min nTPM: 62.3
P10809_1018
90.0
P10809_1037
69.0
P10809_1056
74.4
P10809_1075
62.3
P10809_1094
68.2
P10809_1106
134.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
277.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 211.2
Samples: 4
Max nTPM: 237.5
Min nTPM: 178.8
RHH5202_R3573
178.8
RHH5230_R3602
201.4
RHH5259_R3631
237.5
RHH5288_R3660
226.9
Effector memory CD8 T-cell nTPM: 238.0
Samples: 4
Max nTPM: 330.0
Min nTPM: 152.1
RHH5203_R3574
330.0
RHH5231_R3603
152.1
RHH5260_R3632
197.7
RHH5289_R3661
272.2
MAIT T-cell nTPM: 234.5
Samples: 4
Max nTPM: 272.1
Min nTPM: 200.4
RHH5233_R3605
217.9
RHH5205_R3576
247.6
RHH5262_R3634
272.1
RHH5297_R3663
200.4
Memory CD4 T-cell TFH nTPM: 188.0
Samples: 4
Max nTPM: 243.6
Min nTPM: 119.0
RHH5300_R3666
162.2
RHH5236_R3608
119.0
RHH5265_R3637
243.6
RHH5208_R3579
227.3
Memory CD4 T-cell Th1 nTPM: 222.4
Samples: 4
Max nTPM: 268.8
Min nTPM: 180.4
RHH5210_R3581
268.8
RHH5302_R3668
212.4
RHH5238_R3610
180.4
RHH5267_R3639
228.0
Memory CD4 T-cell Th1/Th17 nTPM: 231.0
Samples: 4
Max nTPM: 288.2
Min nTPM: 143.1
RHH5303_R3669
259.8
RHH5211_R3582
232.7
RHH5239_R3611
143.1
RHH5268_R3640
288.2
Memory CD4 T-cell Th17 nTPM: 213.3
Samples: 4
Max nTPM: 259.6
Min nTPM: 176.2
RHH5304_R3670
259.6
RHH5212_R3583
176.2
RHH5240_R3612
220.5
RHH5269_R3641
196.9
Memory CD4 T-cell Th2 nTPM: 224.6
Samples: 4
Max nTPM: 282.7
Min nTPM: 201.4
RHH5305_R3671
206.0
RHH5213_R3584
208.3
RHH5241_R3613
201.4
RHH5270_R3642
282.7
Naive CD4 T-cell nTPM: 277.7
Samples: 4
Max nTPM: 337.0
Min nTPM: 206.3
RHH5306_R3672
256.1
RHH5214_R3585
311.5
RHH5242_R3614
206.3
RHH5271_R3643
337.0
Naive CD8 T-cell nTPM: 249.1
Samples: 4
Max nTPM: 309.8
Min nTPM: 190.2
RHH5201_R3572
309.8
RHH5229_R3601
190.2
RHH5258_R3630
270.0
RHH5287_R3659
226.5
Non-Vd2 gdTCR nTPM: 253.6
Samples: 4
Max nTPM: 311.9
Min nTPM: 192.3
RHH5235_R3607
298.7
RHH5264_R3636
311.9
RHH5207_R3578
211.4
RHH5299_R3665
192.3
T-reg nTPM: 232.1
Samples: 4
Max nTPM: 256.1
Min nTPM: 208.8
RHH5301_R3667
230.7
RHH5237_R3609
232.6
RHH5266_R3638
256.1
RHH5209_R3580
208.8
Terminal effector memory CD4 T-cell nTPM: 216.6
Samples: 2
Max nTPM: 269.6
Min nTPM: 163.5
RHH5243_R3615
163.5
RHH5272_R3644
269.6
Terminal effector memory CD8 T-cell nTPM: 211.4
Samples: 4
Max nTPM: 261.1
Min nTPM: 136.7
RHH5232_R3604
136.7
RHH5204_R3575
227.3
RHH5261_R3633
220.6
RHH5296_R3662
261.1
Vd2 gdTCR nTPM: 208.3
Samples: 4
Max nTPM: 227.3
Min nTPM: 188.9
RHH5234_R3606
212.3
RHH5206_R3577
227.3
RHH5263_R3635
204.8
RHH5298_R3664
188.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.