HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.0 nTPM
HPA Brain:222.5 nTPM
GTEx:41.0 nTPM
FANTOM5:211.9 Scaled Tags Per Million
Pig:132.0 nTPM
Mouse:219.4 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 222.5
Sample id Sample description nTPM
Hippocampus
nTPM: 169.8
1898 Male, age 80, left hemisphere 241.0
1911 Female, age 85, right hemisphere 208.3
1855 Male, age 76, left hemisphere 197.1
2621 Female, age 67, right hemisphere 162.9
2529 Female, age 94, left hemisphere 117.6
2148 Female, age 91, left hemisphere 91.7
Dentate gyrus
nTPM: 142.3
2010 Male, age 76, both hemispheres 212.3
1927 Female, age 91, both hemispheres 182.3
2530 Female, age 94, left hemisphere 171.4
2246 Female, age 85, both hemispheres 120.0
2528 Male, age 74, both hemispheres 89.3
2531 Female, age 67, both hemispheres 78.6
Entorhinal gyrus
nTPM: 103.7
2764 Male, age 80, right hemisphere 125.9
1938 Female, age 85, left hemisphere 110.2
2613 Female, age 94, left hemisphere 109.9
1787 Male, age 76, left hemisphere 107.3
2117 Female, age 91, right hemisphere 101.4
2686 Male, age 75, right hemisphere 67.7
Hippocampus, CA1
nTPM: 222.5
2749 Male, age 80, left hemisphere 595.0
1873 Female, age 85, both hemispheres 176.3
2527 Male, age 74, both hemispheres 154.9
2082 Female, age 91, right hemisphere 99.5
2045 Male, age 76, both hemispheres 86.7
Hippocampus, CA2
nTPM: 166.9
1963 Male, age 80, left hemisphere 272.8
1892 Male, age 76, both hemispheres 234.8
2249 Male, age 74, both hemispheres 148.3
2437 Female, age 94, left hemisphere 122.0
2113 Female, age 91, right hemisphere 119.8
1940 Female, age 85, left hemisphere 103.7
Hippocampus, CA3
nTPM: 196.9
2137 Male, age 80, left hemisphere 552.0
1867 Male, age 76, both hemispheres 196.0
1891 Female, age 85, both hemispheres 134.9
2436 Male, age 74, both hemispheres 130.6
2861 Female, age 67, both hemispheres 100.1
2620 Female, age 94, left hemisphere 68.0
Parahippocampal cortex
nTPM: 109.7
2245 Female, age 91, both hemispheres 183.4
2018 Male, age 76, both hemispheres 141.7
1850 Male, age 80, both hemispheres 122.9
2532 Female, age 72, left hemisphere 117.1
2250 Female, age 67, right hemisphere 111.3
1933 Female, age 85, both hemispheres 103.3
1990 Female, age 91, right hemisphere 99.2
2693 Female, age 94, both hemispheres 84.1
2692 Male, age 74, both hemispheres 67.6
2622 Female, age 67, right hemisphere 66.4
Perirhinal gyrus
nTPM: 117.5
1794 Male, age 80, right hemisphere 129.2
1847 Female, age 91, left hemisphere 126.9
1841 Female, age 85, right hemisphere 114.0
2521 Female, age 94, right hemisphere 112.7
2848 Male, age 76, right hemisphere 104.6
Subiculum
nTPM: 143.4
1901 Male, age 80, both hemispheres 282.5
2042 Male, age 76, both hemispheres 193.0
1977 Female, age 85, both hemispheres 129.2
2438 Female, age 94, left hemisphere 113.8
2729 Female, age 91, right hemisphere 74.3
2619 Male, age 74, both hemispheres 67.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.0
Samples: 197

Max nTPM: 162.9
Min nTPM: 6.5
Std nTPM: 21.9
Median nTPM: 35.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 162.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 110.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 104.8
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 103.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 100.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 91.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 87.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 86.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 84.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 80.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 80.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.9
FF:10169-103B7 60 years, female 324.0
FF:10153-102I9 76 years, female 99.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.0
Pig sample Sample description nTPM
Subiculum
nTPM: 91.5
Samples: 4

Max nTPM: 123.3
Min nTPM: 65.9
Sample A Female 123.3
Sample B Female 84.6
Sample C Male 92.0
Sample D Male 65.9
Dorsal hippocampus
nTPM: 132.0
Samples: 4

Max nTPM: 184.6
Min nTPM: 62.8
Sample A Female 184.6
Sample B Female 117.7
Sample C Male 163.0
Sample D Male 62.8
Entorhinal cortex
nTPM: 88.3
Samples: 4

Max nTPM: 111.9
Min nTPM: 73.7
Sample A Female 75.2
Sample B Female 111.9
Sample C Male 73.7
Sample D Male 92.5
Ventral hippocampus
nTPM: 123.2
Samples: 4

Max nTPM: 152.3
Min nTPM: 72.3
Sample A Female 152.3
Sample B Female 72.3
Sample C Male 120.4
Sample D Male 147.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 219.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 219.5
Samples: 4

Max nTPM: 254.1
Min nTPM: 200.7
Sample A Male 200.7
Sample B Male 254.1
Sample C Female 205.7
Sample D Female 217.3
Hippocampal formation
nTPM: 165.7
Samples: 4

Max nTPM: 198.7
Min nTPM: 148.4
Sample A Male 198.7
Sample B Male 167.0
Sample C Female 148.7
Sample D Female 148.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
73817427 Antisense, RP_051101_01_A02, Mouse strain C57BL/6J (56 days, male) 13.2
69407469 Antisense, RP_050414_01_G02, Mouse strain C57BL/6J (56 days, male) 9.7

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