HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:214.5 nTPM
HPA Brain:272.4 nTPM
GTEx:214.5 nTPM
FANTOM5:246.4 Scaled Tags Per Million
Pig:607.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071684
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 272.4
Sample id Sample description nTPM
Hippocampus
nTPM: 256.1
2621 Female, age 67, right hemisphere 286.3
2529 Female, age 94, left hemisphere 283.5
1898 Male, age 80, left hemisphere 264.9
2148 Female, age 91, left hemisphere 260.2
1911 Female, age 85, right hemisphere 228.5
1855 Male, age 76, left hemisphere 213.4
Dentate gyrus
nTPM: 249.1
2531 Female, age 67, both hemispheres 294.8
2530 Female, age 94, left hemisphere 279.7
1927 Female, age 91, both hemispheres 253.4
2528 Male, age 74, both hemispheres 232.0
2010 Male, age 76, both hemispheres 229.1
2246 Female, age 85, both hemispheres 205.5
Entorhinal gyrus
nTPM: 252.2
2686 Male, age 75, right hemisphere 283.0
2613 Female, age 94, left hemisphere 271.4
2764 Male, age 80, right hemisphere 267.9
2117 Female, age 91, right hemisphere 233.8
1787 Male, age 76, left hemisphere 233.5
1938 Female, age 85, left hemisphere 223.4
Hippocampus, CA1
nTPM: 238.5
2749 Male, age 80, left hemisphere 288.5
2527 Male, age 74, both hemispheres 244.2
2082 Female, age 91, right hemisphere 239.5
1873 Female, age 85, both hemispheres 215.0
2045 Male, age 76, both hemispheres 205.3
Hippocampus, CA2
nTPM: 237.7
1963 Male, age 80, left hemisphere 291.1
2437 Female, age 94, left hemisphere 259.8
1892 Male, age 76, both hemispheres 237.3
2113 Female, age 91, right hemisphere 227.7
1940 Female, age 85, left hemisphere 207.0
2249 Male, age 74, both hemispheres 203.5
Hippocampus, CA3
nTPM: 272.4
2861 Female, age 67, both hemispheres 341.6
2436 Male, age 74, both hemispheres 331.5
2137 Male, age 80, left hemisphere 263.2
2620 Female, age 94, left hemisphere 250.8
1867 Male, age 76, both hemispheres 240.7
1891 Female, age 85, both hemispheres 206.6
Parahippocampal cortex
nTPM: 233.8
2245 Female, age 91, both hemispheres 263.1
2622 Female, age 67, right hemisphere 254.8
2250 Female, age 67, right hemisphere 233.5
2532 Female, age 72, left hemisphere 232.5
1850 Male, age 80, both hemispheres 230.4
1990 Female, age 91, right hemisphere 229.7
2018 Male, age 76, both hemispheres 226.7
2692 Male, age 74, both hemispheres 226.4
1933 Female, age 85, both hemispheres 223.5
2693 Female, age 94, both hemispheres 217.2
Perirhinal gyrus
nTPM: 240.1
1794 Male, age 80, right hemisphere 275.7
1847 Female, age 91, left hemisphere 261.1
2521 Female, age 94, right hemisphere 233.6
1841 Female, age 85, right hemisphere 224.3
2848 Male, age 76, right hemisphere 205.9
Subiculum
nTPM: 228.9
2619 Male, age 74, both hemispheres 233.9
1901 Male, age 80, both hemispheres 233.0
2438 Female, age 94, left hemisphere 233.0
2042 Male, age 76, both hemispheres 228.5
1977 Female, age 85, both hemispheres 228.0
2729 Female, age 91, right hemisphere 216.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 214.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 214.5
Samples: 197

Max nTPM: 402.4
Min nTPM: 76.1
Std nTPM: 66.9
Median nTPM: 208.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 402.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 393.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 388.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 378.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 374.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 369.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 358.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 355.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 353.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 343.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 339.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 246.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 246.4
FF:10153-102I9 76 years, female 258.2
FF:10169-103B7 60 years, female 234.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 607.9
Pig sample Sample description nTPM
Subiculum
nTPM: 507.1
Samples: 4

Max nTPM: 686.2
Min nTPM: 423.9
Sample A Female 686.2
Sample B Female 458.3
Sample C Male 459.9
Sample D Male 423.9
Dorsal hippocampus
nTPM: 577.6
Samples: 4

Max nTPM: 696.1
Min nTPM: 477.9
Sample A Female 696.1
Sample B Female 538.3
Sample C Male 598.1
Sample D Male 477.9
Entorhinal cortex
nTPM: 607.9
Samples: 4

Max nTPM: 702.9
Min nTPM: 495.4
Sample A Female 555.0
Sample B Female 678.4
Sample C Male 702.9
Sample D Male 495.4
Ventral hippocampus
nTPM: 548.9
Samples: 4

Max nTPM: 681.2
Min nTPM: 440.8
Sample A Female 540.0
Sample B Female 440.8
Sample C Male 681.2
Sample D Male 533.7

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