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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
272.0
nTPM
FANTOM5:
265.9
Scaled Tags Per Million
Pig:
634.2
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
272.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 229.2
1984
Male, age 76, both hemispheres
246.6
2090
Male, age 80, both hemispheres
231.4
2301
Female, age 85, both hemispheres
230.6
2188
Female, age 91, both hemispheres
208.3
Dorsal cochlear nucleus nTPM: 246.7
2802
Male, age 74, right hemisphere
277.4
2058
Male, age 76, both hemispheres
251.4
2378
Male, age 80, both hemispheres
250.3
2370
Male, age 61, both hemispheres
229.6
2187
Female, age 91, both hemispheres
224.9
Dorsal tegmental nucleus nTPM: 229.1
2083
Male, age 80, both hemispheres
243.9
2358
Male, age 61, both hemispheres
231.1
2326
Male, age 74, both hemispheres
228.6
1936
Male, age 76, left hemisphere
212.8
Dorsolateral tegmental area nTPM: 239.1
2141
Male, age 76, both hemispheres
269.7
2337
Male, age 61, both hemispheres
266.7
2654
Male, age 80, both hemispheres
241.6
2360
Male, age 74, both hemispheres
211.3
2751
Female, age 85, both hemispheres
206.0
Kolliker-Fuse nucleus nTPM: 230.1
2163
Male, age 80, both hemispheres
237.7
2793
Female, age 91, left hemisphere
236.8
2315
Male, age 76, right hemisphere
215.9
Lateral lemniscal nuclei nTPM: 241.2
2169
Male, age 76, both hemispheres
270.9
2746
Female, age 85, left hemisphere
265.0
2453
Male, age 74, right hemisphere
238.3
2320
Female, age 91, left hemisphere
232.3
2036
Male, age 80, both hemispheres
199.5
Lateral parabrachial nucleus nTPM: 227.8
2139
Female, age 85, right hemisphere
265.5
2790
Male, age 61, both hemispheres
227.6
2013
Male, age 80, both hemispheres
226.0
2792
Male, age 76, both hemispheres
192.1
Lateral vestibular nucleus nTPM: 237.0
2311
Male, age 80, both hemispheres
242.5
2184
Male, age 76, both hemispheres
231.5
Locus coeruleus nTPM: 226.8
2720
Male, age 74, both hemispheres
243.5
2162
Male, age 80, both hemispheres
242.8
2123
Female, age 91, both hemispheres
240.3
1980
Male, age 76, both hemispheres
235.3
2317
Female, age 72, unknown
225.7
2014
Male, age 55, unknown
223.3
2788
Male, age 74, unknown
176.8
Medial parabrachial nucleus nTPM: 228.2
2156
Male, age 61, both hemispheres
251.5
2170
Female, age 91, both hemispheres
232.5
2786
Male, age 76, both hemispheres
228.0
2463
Female, age 85, right hemisphere
217.8
2854
Male, age 80, both hemispheres
211.2
Medial periolivary nuclei nTPM: 249.6
2063
Male, age 76, both hemispheres
304.8
2171
Female, age 85, both hemispheres
293.5
2458
Female, age 91, both hemispheres
230.9
2081
Male, age 80, both hemispheres
221.0
2791
Male, age 74, right hemisphere
197.9
Motor facial nucleus nTPM: 251.4
2062
Male, age 76, both hemispheres
319.5
2795
Female, age 91, both hemispheres
269.2
2697
Female, age 85, both hemispheres
243.6
2365
Male, age 74, right hemisphere
235.1
2327
Male, age 80, both hemispheres
225.5
2126
Male, age 61, both hemispheres
215.1
Motor trigeminal nucleus nTPM: 242.3
2335
Male, age 61, both hemispheres
255.3
2560
Male, age 74, both hemispheres
247.2
2079
Male, age 80, both hemispheres
237.6
2309
Male, age 76, both hemispheres
237.2
2321
Female, age 91, both hemispheres
234.5
Nuclei of the trapezoid body nTPM: 272.0
1983
Male, age 76, both hemispheres
336.8
2735
Female, age 85, both hemispheres
312.9
2159
Male, age 61, both hemispheres
245.8
2368
Female, age 91, both hemispheres
238.6
2166
Male, age 80, both hemispheres
226.0
Nucleus raphe magnus nTPM: 260.8
2172
Female, age 85, both hemispheres
326.7
2051
Male, age 76, both hemispheres
268.0
2160
Male, age 61, both hemispheres
263.8
2455
Male, age 74, both hemispheres
245.5
2328
Male, age 80, both hemispheres
237.5
2459
Female, age 91, both hemispheres
223.4
Paramedian reticular nucleus nTPM: 215.4
2050
Female, age 85, both hemispheres
240.6
2057
Male, age 80, both hemispheres
228.3
2313
Male, age 61, both hemispheres
226.4
2052
Male, age 76, both hemispheres
166.3
Pedunculopontine tegmental nucleus nTPM: 224.1
1921
Female, age 85, both hemispheres
225.7
2334
Male, age 80, both hemispheres
224.0
2338
Male, age 61, both hemispheres
222.5
Pontine nuclei nTPM: 258.0
2787
Female, age 85, both hemispheres
368.6
1968
Male, age 76, left hemisphere
307.4
1863
Male, age 55, unknown
267.5
2115
Male, age 80, left hemisphere
239.9
2727
Male, age 61, right hemisphere
234.4
2319
Female, age 91, both hemispheres
229.7
2109
Female, age 72, unknown
229.5
2454
Male, age 74, left hemisphere
186.9
Pontine raphe nucleus nTPM: 251.9
2122
Female, age 85, midline
265.0
2853
Male, age 76, midline
238.8
Posteroventral cochlear nucleus nTPM: 224.6
2752
Female, age 85, both hemispheres
257.1
2371
Male, age 61, both hemispheres
242.1
2070
Male, age 76, both hemispheres
225.0
2135
Female, age 91, both hemispheres
202.4
2341
Male, age 80, both hemispheres
196.3
Principal sensory trigeminal nucleus nTPM: 244.4
2158
Male, age 61, both hemispheres
271.3
2324
Male, age 76, both hemispheres
251.4
2008
Male, age 80, left hemisphere
232.3
2367
Female, age 91, left hemisphere
222.5
Reticular pontine nucleus, caudal nTPM: 235.9
2092
Male, age 76, both hemispheres
259.2
2332
Male, age 80, right hemisphere
245.6
2457
Female, age 91, both hemispheres
220.6
2559
Male, age 74, both hemispheres
218.2
Reticular pontine nucleus, oral nTPM: 224.7
2167
Male, age 76, both hemispheres
239.0
2012
Female, age 85, both hemispheres
229.5
1939
Male, age 80, both hemispheres
222.3
2366
Female, age 91, both hemispheres
221.3
2361
Male, age 74, both hemispheres
211.1
Reticulotegmental nucleus nTPM: 240.5
2452
Male, age 74, both hemispheres
263.2
2325
Male, age 76, both hemispheres
246.5
2333
Male, age 80, both hemispheres
226.3
2322
Female, age 91, both hemispheres
226.2
Spinal trigeminal nucleus, oral nTPM: 240.8
2164
Male, age 80, both hemispheres
244.0
1978
Male, age 76, both hemispheres
243.5
2737
Female, age 85, both hemispheres
234.9
Subcoeruleus area nTPM: 236.8
2451
Male, age 74, both hemispheres
275.6
2323
Female, age 91, left hemisphere
256.0
2089
Male, age 76, left hemisphere
245.9
1958
Male, age 80, both hemispheres
214.6
2369
Female, age 85, left hemisphere
192.2
Superior olive nTPM: 237.7
2020
Male, age 76, both hemispheres
259.9
2561
Female, age 91, both hemispheres
256.1
1875
Female, age 85, both hemispheres
245.8
2329
Male, age 80, right hemisphere
221.9
2364
Male, age 74, right hemisphere
204.7
Ventral periolivary nuclei nTPM: 258.3
2130
Female, age 85, both hemispheres
288.1
2165
Male, age 80, both hemispheres
255.7
2794
Female, age 91, left hemisphere
254.3
2023
Male, age 76, both hemispheres
235.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 236.2
1959
Male, age 76, both hemispheres
247.2
2449
Male, age 74, both hemispheres
246.2
2161
Male, age 80, both hemispheres
237.8
2840
Female, age 85, both hemispheres
235.8
2456
Female, age 91, both hemispheres
227.2
2359
Male, age 61, both hemispheres
223.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
