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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
467.7
nTPM
Monaco:
751.2
nTPM
Schmiedel:
651.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
467.7
HPA sample
nTPM
gdT-cell nTPM: 320.2
Samples: 6
Max nTPM: 400.8
Min nTPM: 235.8
P10809_1007
400.8
P10809_1022
346.6
P10809_1041
375.7
P10809_1060
235.8
P10809_1077
246.4
P10809_1098
315.8
MAIT T-cell nTPM: 467.7
Samples: 6
Max nTPM: 603.5
Min nTPM: 376.5
P10809_1006
603.5
P10809_1024
454.1
P10809_1043
471.8
P10809_1062
427.3
P10809_1083
376.5
P10809_1097
472.8
Memory CD4 T-cell nTPM: 432.5
Samples: 6
Max nTPM: 586.2
Min nTPM: 296.3
P10809_1014
586.2
P10809_1026
508.6
P10809_1045
398.9
P10809_1064
323.8
P10809_1086
296.3
P10809_1113
481.3
Memory CD8 T-cell nTPM: 377.8
Samples: 5
Max nTPM: 563.7
Min nTPM: 292.3
P10809_1012
563.7
P10809_1027
331.9
P10809_1046
372.0
P10809_1065
292.3
P10809_1111
329.0
Naive CD4 T-cell nTPM: 397.2
Samples: 6
Max nTPM: 564.5
Min nTPM: 291.2
P10809_1015
564.5
P10809_1030
361.8
P10809_1049
333.5
P10809_1068
419.3
P10809_1085
291.2
P10809_1112
412.7
Naive CD8 T-cell nTPM: 400.9
Samples: 6
Max nTPM: 671.0
Min nTPM: 234.9
P10809_1016
671.0
P10809_1031
394.7
P10809_1050
316.6
P10809_1069
386.0
P10809_1087
234.9
P10809_1110
402.0
T-reg nTPM: 448.8
Samples: 6
Max nTPM: 584.7
Min nTPM: 369.4
P10809_1018
584.7
P10809_1037
369.4
P10809_1056
396.5
P10809_1075
459.3
P10809_1094
413.9
P10809_1106
468.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
751.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 641.1
Samples: 4
Max nTPM: 769.2
Min nTPM: 380.9
RHH5202_R3573
734.4
RHH5230_R3602
679.8
RHH5259_R3631
380.9
RHH5288_R3660
769.2
Effector memory CD8 T-cell nTPM: 489.2
Samples: 4
Max nTPM: 615.4
Min nTPM: 321.9
RHH5203_R3574
615.4
RHH5231_R3603
554.4
RHH5260_R3632
321.9
RHH5289_R3661
465.1
MAIT T-cell nTPM: 631.9
Samples: 4
Max nTPM: 754.9
Min nTPM: 458.4
RHH5233_R3605
675.0
RHH5205_R3576
458.4
RHH5262_R3634
639.2
RHH5297_R3663
754.9
Memory CD4 T-cell TFH nTPM: 690.9
Samples: 4
Max nTPM: 747.5
Min nTPM: 657.7
RHH5300_R3666
747.5
RHH5236_R3608
660.5
RHH5265_R3637
657.7
RHH5208_R3579
697.7
Memory CD4 T-cell Th1 nTPM: 580.0
Samples: 4
Max nTPM: 793.7
Min nTPM: 423.8
RHH5210_R3581
657.7
RHH5302_R3668
793.7
RHH5238_R3610
423.8
RHH5267_R3639
444.8
Memory CD4 T-cell Th1/Th17 nTPM: 594.8
Samples: 4
Max nTPM: 839.3
Min nTPM: 314.0
RHH5303_R3669
777.2
RHH5211_R3582
839.3
RHH5239_R3611
314.0
RHH5268_R3640
448.5
Memory CD4 T-cell Th17 nTPM: 578.5
Samples: 4
Max nTPM: 781.2
Min nTPM: 439.3
RHH5304_R3670
641.4
RHH5212_R3583
781.2
RHH5240_R3612
439.3
RHH5269_R3641
452.1
Memory CD4 T-cell Th2 nTPM: 751.3
Samples: 4
Max nTPM: 921.0
Min nTPM: 602.3
RHH5305_R3671
780.5
RHH5213_R3584
701.2
RHH5241_R3613
921.0
RHH5270_R3642
602.3
Naive CD4 T-cell nTPM: 659.3
Samples: 4
Max nTPM: 758.0
Min nTPM: 502.5
RHH5306_R3672
758.0
RHH5214_R3585
695.7
RHH5242_R3614
680.9
RHH5271_R3643
502.5
Naive CD8 T-cell nTPM: 613.3
Samples: 4
Max nTPM: 747.0
Min nTPM: 311.3
RHH5201_R3572
747.0
RHH5229_R3601
311.3
RHH5258_R3630
725.4
RHH5287_R3659
669.4
Non-Vd2 gdTCR nTPM: 429.3
Samples: 4
Max nTPM: 475.0
Min nTPM: 334.7
RHH5235_R3607
334.7
RHH5264_R3636
473.2
RHH5207_R3578
434.4
RHH5299_R3665
475.0
T-reg nTPM: 564.8
Samples: 4
Max nTPM: 702.0
Min nTPM: 457.4
RHH5301_R3667
702.0
RHH5237_R3609
639.7
RHH5266_R3638
457.4
RHH5209_R3580
460.1
Terminal effector memory CD4 T-cell nTPM: 462.9
Samples: 2
Max nTPM: 629.1
Min nTPM: 296.7
RHH5243_R3615
296.7
RHH5272_R3644
629.1
Terminal effector memory CD8 T-cell nTPM: 463.7
Samples: 4
Max nTPM: 549.3
Min nTPM: 281.8
RHH5232_R3604
549.3
RHH5204_R3575
476.5
RHH5261_R3633
281.8
RHH5296_R3662
547.1
Vd2 gdTCR nTPM: 592.9
Samples: 4
Max nTPM: 750.4
Min nTPM: 414.4
RHH5234_R3606
750.4
RHH5206_R3577
534.6
RHH5263_R3635
414.4
RHH5298_R3664
672.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.