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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
127.1
nTPM
Monaco:
94.2
nTPM
Schmiedel:
63.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.1
HPA sample
nTPM
gdT-cell nTPM: 79.1
Samples: 6
Max nTPM: 127.5
Min nTPM: 58.6
P10809_1007
58.6
P10809_1022
83.2
P10809_1041
127.5
P10809_1060
66.5
P10809_1077
72.1
P10809_1098
66.9
MAIT T-cell nTPM: 86.5
Samples: 6
Max nTPM: 103.3
Min nTPM: 60.7
P10809_1006
60.7
P10809_1024
99.6
P10809_1043
103.3
P10809_1062
73.6
P10809_1083
99.1
P10809_1097
82.7
Memory CD4 T-cell nTPM: 111.5
Samples: 6
Max nTPM: 152.5
Min nTPM: 82.7
P10809_1014
82.7
P10809_1026
152.5
P10809_1045
128.5
P10809_1064
104.2
P10809_1086
95.9
P10809_1113
105.1
Memory CD8 T-cell nTPM: 95.8
Samples: 5
Max nTPM: 108.7
Min nTPM: 84.8
P10809_1012
84.8
P10809_1027
94.3
P10809_1046
108.7
P10809_1065
98.0
P10809_1111
93.0
Naive CD4 T-cell nTPM: 127.1
Samples: 6
Max nTPM: 175.6
Min nTPM: 84.6
P10809_1015
84.6
P10809_1030
150.3
P10809_1049
175.6
P10809_1068
122.6
P10809_1085
113.7
P10809_1112
115.7
Naive CD8 T-cell nTPM: 100.0
Samples: 6
Max nTPM: 117.3
Min nTPM: 75.4
P10809_1016
100.2
P10809_1031
105.7
P10809_1050
117.3
P10809_1069
97.9
P10809_1087
75.4
P10809_1110
103.7
T-reg nTPM: 113.3
Samples: 6
Max nTPM: 155.8
Min nTPM: 70.1
P10809_1018
80.3
P10809_1037
155.8
P10809_1056
137.6
P10809_1075
70.1
P10809_1094
101.2
P10809_1106
134.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.1
Samples: 4
Max nTPM: 84.0
Min nTPM: 48.3
RHH5202_R3573
71.8
RHH5230_R3602
56.4
RHH5259_R3631
48.3
RHH5288_R3660
84.0
Effector memory CD8 T-cell nTPM: 53.9
Samples: 4
Max nTPM: 74.0
Min nTPM: 39.0
RHH5203_R3574
74.0
RHH5231_R3603
62.8
RHH5260_R3632
39.9
RHH5289_R3661
39.0
MAIT T-cell nTPM: 52.9
Samples: 4
Max nTPM: 62.9
Min nTPM: 42.1
RHH5233_R3605
62.9
RHH5205_R3576
42.1
RHH5262_R3634
52.3
RHH5297_R3663
54.1
Memory CD4 T-cell TFH nTPM: 80.0
Samples: 4
Max nTPM: 102.8
Min nTPM: 60.9
RHH5300_R3666
71.0
RHH5236_R3608
102.8
RHH5265_R3637
60.9
RHH5208_R3579
85.1
Memory CD4 T-cell Th1 nTPM: 77.3
Samples: 4
Max nTPM: 109.0
Min nTPM: 59.1
RHH5210_R3581
76.9
RHH5302_R3668
109.0
RHH5238_R3610
64.3
RHH5267_R3639
59.1
Memory CD4 T-cell Th1/Th17 nTPM: 55.5
Samples: 4
Max nTPM: 99.0
Min nTPM: 31.3
RHH5303_R3669
99.0
RHH5211_R3582
51.9
RHH5239_R3611
31.3
RHH5268_R3640
39.7
Memory CD4 T-cell Th17 nTPM: 51.0
Samples: 4
Max nTPM: 75.9
Min nTPM: 35.4
RHH5304_R3670
45.8
RHH5212_R3583
75.9
RHH5240_R3612
35.4
RHH5269_R3641
46.8
Memory CD4 T-cell Th2 nTPM: 94.2
Samples: 4
Max nTPM: 143.9
Min nTPM: 61.6
RHH5305_R3671
99.7
RHH5213_R3584
71.7
RHH5241_R3613
143.9
RHH5270_R3642
61.6
Naive CD4 T-cell nTPM: 82.2
Samples: 4
Max nTPM: 100.9
Min nTPM: 49.2
RHH5306_R3672
100.9
RHH5214_R3585
90.2
RHH5242_R3614
88.5
RHH5271_R3643
49.2
Naive CD8 T-cell nTPM: 78.5
Samples: 4
Max nTPM: 101.9
Min nTPM: 61.1
RHH5201_R3572
81.7
RHH5229_R3601
61.1
RHH5258_R3630
101.9
RHH5287_R3659
69.4
Non-Vd2 gdTCR nTPM: 55.5
Samples: 4
Max nTPM: 74.3
Min nTPM: 37.1
RHH5235_R3607
39.8
RHH5264_R3636
74.3
RHH5207_R3578
37.1
RHH5299_R3665
70.8
T-reg nTPM: 66.5
Samples: 4
Max nTPM: 91.2
Min nTPM: 38.0
RHH5301_R3667
77.2
RHH5237_R3609
91.2
RHH5266_R3638
38.0
RHH5209_R3580
59.7
Terminal effector memory CD4 T-cell nTPM: 54.9
Samples: 2
Max nTPM: 75.3
Min nTPM: 34.5
RHH5243_R3615
34.5
RHH5272_R3644
75.3
Terminal effector memory CD8 T-cell nTPM: 50.9
Samples: 4
Max nTPM: 69.0
Min nTPM: 30.1
RHH5232_R3604
51.0
RHH5204_R3575
69.0
RHH5261_R3633
30.1
RHH5296_R3662
53.6
Vd2 gdTCR nTPM: 68.5
Samples: 4
Max nTPM: 100.3
Min nTPM: 31.1
RHH5234_R3606
61.2
RHH5206_R3577
100.3
RHH5263_R3635
31.1
RHH5298_R3664
81.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
