HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.3 nTPM
HPA Brain:37.5 nTPM
GTEx:31.3 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:65.9 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041508Antibody HPA061309
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.5
Sample id Sample description nTPM
Hippocampus
nTPM: 34.4
1898 Male, age 80, left hemisphere 38.2
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 35.6
2148 Female, age 91, left hemisphere 33.4
2529 Female, age 94, left hemisphere 31.2
1911 Female, age 85, right hemisphere 30.4
Dentate gyrus
nTPM: 32.4
2010 Male, age 76, both hemispheres 34.2
1927 Female, age 91, both hemispheres 33.9
2531 Female, age 67, both hemispheres 32.7
2530 Female, age 94, left hemisphere 32.2
2528 Male, age 74, both hemispheres 31.7
2246 Female, age 85, both hemispheres 29.7
Entorhinal gyrus
nTPM: 37.5
2764 Male, age 80, right hemisphere 41.5
2686 Male, age 75, right hemisphere 38.7
2117 Female, age 91, right hemisphere 36.9
1938 Female, age 85, left hemisphere 36.1
2613 Female, age 94, left hemisphere 36.0
1787 Male, age 76, left hemisphere 35.9
Hippocampus, CA1
nTPM: 34.7
2749 Male, age 80, left hemisphere 43.6
2045 Male, age 76, both hemispheres 37.2
1873 Female, age 85, both hemispheres 34.0
2527 Male, age 74, both hemispheres 29.9
2082 Female, age 91, right hemisphere 29.0
Hippocampus, CA2
nTPM: 33.5
1892 Male, age 76, both hemispheres 43.6
1963 Male, age 80, left hemisphere 38.6
1940 Female, age 85, left hemisphere 30.3
2113 Female, age 91, right hemisphere 30.2
2437 Female, age 94, left hemisphere 30.0
2249 Male, age 74, both hemispheres 28.4
Hippocampus, CA3
nTPM: 37.0
1867 Male, age 76, both hemispheres 45.9
2620 Female, age 94, left hemisphere 39.7
2861 Female, age 67, both hemispheres 37.1
2137 Male, age 80, left hemisphere 37.0
1891 Female, age 85, both hemispheres 34.2
2436 Male, age 74, both hemispheres 27.9
Parahippocampal cortex
nTPM: 32.9
1850 Male, age 80, both hemispheres 37.9
1990 Female, age 91, right hemisphere 34.8
2692 Male, age 74, both hemispheres 34.4
1933 Female, age 85, both hemispheres 33.5
2245 Female, age 91, both hemispheres 32.1
2693 Female, age 94, both hemispheres 31.9
2622 Female, age 67, right hemisphere 31.8
2532 Female, age 72, left hemisphere 31.6
2250 Female, age 67, right hemisphere 30.5
2018 Male, age 76, both hemispheres 30.0
Perirhinal gyrus
nTPM: 35.3
1847 Female, age 91, left hemisphere 39.4
1794 Male, age 80, right hemisphere 36.7
2848 Male, age 76, right hemisphere 35.5
1841 Female, age 85, right hemisphere 33.2
2521 Female, age 94, right hemisphere 31.4
Subiculum
nTPM: 33.9
2042 Male, age 76, both hemispheres 38.8
1901 Male, age 80, both hemispheres 38.0
1977 Female, age 85, both hemispheres 35.0
2619 Male, age 74, both hemispheres 32.1
2729 Female, age 91, right hemisphere 31.0
2438 Female, age 94, left hemisphere 28.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 49.6
Min nTPM: 19.4
Std nTPM: 4.6
Median nTPM: 30.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 49.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 40.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 40.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 40.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 40.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 39.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.5
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 25.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.5
Sample A Female 17.0
Sample B Female 12.5
Sample C Male 14.4
Sample D Male 12.6
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.1
Sample A Female 18.6
Sample B Female 14.4
Sample C Male 15.5
Sample D Male 11.1
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.3
Sample A Female 14.2
Sample B Female 13.8
Sample C Male 13.7
Sample D Male 11.3
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.1
Sample A Female 15.2
Sample B Female 11.1
Sample C Male 18.4
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 61.2
Sample A Male 61.2
Sample B Male 67.4
Sample C Female 66.1
Sample D Female 61.3
Hippocampal formation
nTPM: 65.9
Samples: 4

Max nTPM: 71.6
Min nTPM: 61.9
Sample A Male 61.9
Sample B Male 63.5
Sample C Female 71.6
Sample D Female 66.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
80514013 Antisense, RP_071213_02_E06, Mouse strain C57BL/6J (56 days, male) 1.1

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