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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
94.7
nTPM
Monaco:
100.8
nTPM
Schmiedel:
114.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.7
HPA sample
nTPM
gdT-cell nTPM: 71.4
Samples: 6
Max nTPM: 86.3
Min nTPM: 47.9
P10809_1007
47.9
P10809_1022
86.3
P10809_1041
79.6
P10809_1060
61.2
P10809_1077
75.0
P10809_1098
78.6
MAIT T-cell nTPM: 56.9
Samples: 6
Max nTPM: 72.6
Min nTPM: 43.2
P10809_1006
43.2
P10809_1024
72.6
P10809_1043
59.1
P10809_1062
56.0
P10809_1083
45.9
P10809_1097
64.7
Memory CD4 T-cell nTPM: 57.5
Samples: 6
Max nTPM: 64.6
Min nTPM: 45.4
P10809_1014
45.4
P10809_1026
64.1
P10809_1045
57.5
P10809_1064
56.6
P10809_1086
64.6
P10809_1113
56.6
Memory CD8 T-cell nTPM: 66.7
Samples: 5
Max nTPM: 85.4
Min nTPM: 50.9
P10809_1012
50.9
P10809_1027
85.4
P10809_1046
70.3
P10809_1065
58.0
P10809_1111
68.9
Naive CD4 T-cell nTPM: 47.8
Samples: 6
Max nTPM: 53.4
Min nTPM: 32.1
P10809_1015
32.1
P10809_1030
49.5
P10809_1049
53.4
P10809_1068
51.8
P10809_1085
52.0
P10809_1112
47.7
Naive CD8 T-cell nTPM: 59.1
Samples: 6
Max nTPM: 72.7
Min nTPM: 40.2
P10809_1016
40.2
P10809_1031
63.9
P10809_1050
52.8
P10809_1069
70.8
P10809_1087
72.7
P10809_1110
53.9
T-reg nTPM: 94.7
Samples: 6
Max nTPM: 149.4
Min nTPM: 74.9
P10809_1018
74.9
P10809_1037
75.5
P10809_1056
149.4
P10809_1075
85.7
P10809_1094
99.3
P10809_1106
83.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 64.0
Samples: 4
Max nTPM: 70.9
Min nTPM: 58.4
RHH5202_R3573
58.4
RHH5230_R3602
60.4
RHH5259_R3631
66.3
RHH5288_R3660
70.9
Effector memory CD8 T-cell nTPM: 93.9
Samples: 4
Max nTPM: 110.0
Min nTPM: 79.0
RHH5203_R3574
79.0
RHH5231_R3603
90.6
RHH5260_R3632
110.0
RHH5289_R3661
96.0
MAIT T-cell nTPM: 61.1
Samples: 4
Max nTPM: 73.4
Min nTPM: 55.9
RHH5233_R3605
73.4
RHH5205_R3576
57.6
RHH5262_R3634
55.9
RHH5297_R3663
57.6
Memory CD4 T-cell TFH nTPM: 60.6
Samples: 4
Max nTPM: 68.5
Min nTPM: 49.6
RHH5300_R3666
49.6
RHH5236_R3608
68.5
RHH5265_R3637
62.8
RHH5208_R3579
61.3
Memory CD4 T-cell Th1 nTPM: 66.9
Samples: 4
Max nTPM: 85.6
Min nTPM: 52.9
RHH5210_R3581
52.9
RHH5302_R3668
65.9
RHH5238_R3610
85.6
RHH5267_R3639
63.2
Memory CD4 T-cell Th1/Th17 nTPM: 75.3
Samples: 4
Max nTPM: 89.1
Min nTPM: 61.8
RHH5303_R3669
75.8
RHH5211_R3582
74.3
RHH5239_R3611
89.1
RHH5268_R3640
61.8
Memory CD4 T-cell Th17 nTPM: 63.8
Samples: 4
Max nTPM: 73.8
Min nTPM: 49.2
RHH5304_R3670
72.7
RHH5212_R3583
59.4
RHH5240_R3612
73.8
RHH5269_R3641
49.2
Memory CD4 T-cell Th2 nTPM: 65.1
Samples: 4
Max nTPM: 75.2
Min nTPM: 56.8
RHH5305_R3671
75.2
RHH5213_R3584
56.8
RHH5241_R3613
65.7
RHH5270_R3642
62.8
Naive CD4 T-cell nTPM: 56.6
Samples: 4
Max nTPM: 69.3
Min nTPM: 45.1
RHH5306_R3672
58.5
RHH5214_R3585
45.1
RHH5242_R3614
53.6
RHH5271_R3643
69.3
Naive CD8 T-cell nTPM: 56.3
Samples: 4
Max nTPM: 61.4
Min nTPM: 44.9
RHH5201_R3572
61.4
RHH5229_R3601
44.9
RHH5258_R3630
59.1
RHH5287_R3659
59.6
Non-Vd2 gdTCR nTPM: 99.9
Samples: 4
Max nTPM: 122.2
Min nTPM: 70.9
RHH5235_R3607
70.9
RHH5264_R3636
122.2
RHH5207_R3578
95.5
RHH5299_R3665
110.9
T-reg nTPM: 66.2
Samples: 4
Max nTPM: 83.5
Min nTPM: 53.7
RHH5301_R3667
66.8
RHH5237_R3609
83.5
RHH5266_R3638
53.7
RHH5209_R3580
60.6
Terminal effector memory CD4 T-cell nTPM: 90.7
Samples: 2
Max nTPM: 103.3
Min nTPM: 78.0
RHH5243_R3615
103.3
RHH5272_R3644
78.0
Terminal effector memory CD8 T-cell nTPM: 100.8
Samples: 4
Max nTPM: 106.6
Min nTPM: 97.9
RHH5232_R3604
106.6
RHH5204_R3575
97.9
RHH5261_R3633
99.1
RHH5296_R3662
99.5
Vd2 gdTCR nTPM: 72.0
Samples: 4
Max nTPM: 102.5
Min nTPM: 61.0
RHH5234_R3606
61.4
RHH5206_R3577
102.5
RHH5263_R3635
63.0
RHH5298_R3664
61.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
