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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.1
nTPM
Monaco:
130.6
nTPM
Schmiedel:
136.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.1
HPA sample
nTPM
gdT-cell nTPM: 62.6
Samples: 6
Max nTPM: 80.9
Min nTPM: 37.2
P10809_1007
37.2
P10809_1022
65.0
P10809_1041
76.8
P10809_1060
67.0
P10809_1077
48.4
P10809_1098
80.9
MAIT T-cell nTPM: 63.1
Samples: 6
Max nTPM: 73.0
Min nTPM: 59.3
P10809_1006
62.0
P10809_1024
59.3
P10809_1043
60.6
P10809_1062
62.3
P10809_1083
61.4
P10809_1097
73.0
Memory CD4 T-cell nTPM: 58.0
Samples: 6
Max nTPM: 78.6
Min nTPM: 44.5
P10809_1014
52.4
P10809_1026
78.6
P10809_1045
54.6
P10809_1064
48.1
P10809_1086
44.5
P10809_1113
69.9
Memory CD8 T-cell nTPM: 57.8
Samples: 5
Max nTPM: 67.3
Min nTPM: 45.6
P10809_1012
53.6
P10809_1027
67.3
P10809_1046
65.8
P10809_1065
45.6
P10809_1111
56.6
Naive CD4 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 55.3
Min nTPM: 31.2
P10809_1015
31.2
P10809_1030
49.8
P10809_1049
54.2
P10809_1068
55.2
P10809_1085
39.6
P10809_1112
55.3
Naive CD8 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 51.5
Min nTPM: 35.3
P10809_1016
38.4
P10809_1031
46.1
P10809_1050
51.5
P10809_1069
40.6
P10809_1087
35.3
P10809_1110
47.5
T-reg nTPM: 61.0
Samples: 6
Max nTPM: 73.8
Min nTPM: 51.7
P10809_1018
60.8
P10809_1037
63.4
P10809_1056
57.5
P10809_1075
58.9
P10809_1094
73.8
P10809_1106
51.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.5
Samples: 4
Max nTPM: 104.1
Min nTPM: 90.6
RHH5202_R3573
94.4
RHH5230_R3602
90.6
RHH5259_R3631
97.0
RHH5288_R3660
104.1
Effector memory CD8 T-cell nTPM: 85.4
Samples: 4
Max nTPM: 89.5
Min nTPM: 77.0
RHH5203_R3574
89.0
RHH5231_R3603
77.0
RHH5260_R3632
86.1
RHH5289_R3661
89.5
MAIT T-cell nTPM: 123.9
Samples: 4
Max nTPM: 150.6
Min nTPM: 103.8
RHH5233_R3605
103.8
RHH5205_R3576
150.6
RHH5262_R3634
130.1
RHH5297_R3663
111.0
Memory CD4 T-cell TFH nTPM: 107.2
Samples: 4
Max nTPM: 118.4
Min nTPM: 95.4
RHH5300_R3666
118.4
RHH5236_R3608
95.4
RHH5265_R3637
113.0
RHH5208_R3579
101.9
Memory CD4 T-cell Th1 nTPM: 92.5
Samples: 4
Max nTPM: 101.2
Min nTPM: 85.6
RHH5210_R3581
93.1
RHH5302_R3668
90.1
RHH5238_R3610
85.6
RHH5267_R3639
101.2
Memory CD4 T-cell Th1/Th17 nTPM: 119.8
Samples: 4
Max nTPM: 142.0
Min nTPM: 100.8
RHH5303_R3669
142.0
RHH5211_R3582
126.4
RHH5239_R3611
100.8
RHH5268_R3640
110.1
Memory CD4 T-cell Th17 nTPM: 130.6
Samples: 4
Max nTPM: 138.5
Min nTPM: 118.8
RHH5304_R3670
137.6
RHH5212_R3583
127.6
RHH5240_R3612
138.5
RHH5269_R3641
118.8
Memory CD4 T-cell Th2 nTPM: 99.1
Samples: 4
Max nTPM: 106.1
Min nTPM: 82.9
RHH5305_R3671
106.1
RHH5213_R3584
104.1
RHH5241_R3613
82.9
RHH5270_R3642
103.3
Naive CD4 T-cell nTPM: 89.4
Samples: 4
Max nTPM: 107.8
Min nTPM: 71.5
RHH5306_R3672
101.5
RHH5214_R3585
76.8
RHH5242_R3614
71.5
RHH5271_R3643
107.8
Naive CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 104.5
Min nTPM: 73.0
RHH5201_R3572
95.5
RHH5229_R3601
88.2
RHH5258_R3630
104.5
RHH5287_R3659
73.0
Non-Vd2 gdTCR nTPM: 105.1
Samples: 4
Max nTPM: 118.8
Min nTPM: 93.2
RHH5235_R3607
118.8
RHH5264_R3636
93.9
RHH5207_R3578
114.5
RHH5299_R3665
93.2
T-reg nTPM: 99.3
Samples: 4
Max nTPM: 117.3
Min nTPM: 85.3
RHH5301_R3667
103.9
RHH5237_R3609
85.3
RHH5266_R3638
117.3
RHH5209_R3580
90.8
Terminal effector memory CD4 T-cell nTPM: 81.5
Samples: 2
Max nTPM: 93.3
Min nTPM: 69.7
RHH5243_R3615
69.7
RHH5272_R3644
93.3
Terminal effector memory CD8 T-cell nTPM: 88.0
Samples: 4
Max nTPM: 109.2
Min nTPM: 69.6
RHH5232_R3604
69.6
RHH5204_R3575
85.9
RHH5261_R3633
109.2
RHH5296_R3662
87.1
Vd2 gdTCR nTPM: 102.5
Samples: 4
Max nTPM: 111.4
Min nTPM: 98.0
RHH5234_R3606
100.9
RHH5206_R3577
98.0
RHH5263_R3635
111.4
RHH5298_R3664
99.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
