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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
407.7
nTPM
Monaco:
265.0
nTPM
Schmiedel:
112.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
407.7
HPA sample
nTPM
gdT-cell nTPM: 407.7
Samples: 6
Max nTPM: 555.3
Min nTPM: 247.5
P10809_1007
247.5
P10809_1022
511.1
P10809_1041
555.3
P10809_1060
316.3
P10809_1077
376.3
P10809_1098
439.9
MAIT T-cell nTPM: 348.5
Samples: 6
Max nTPM: 427.9
Min nTPM: 225.9
P10809_1006
225.9
P10809_1024
375.0
P10809_1043
427.9
P10809_1062
344.1
P10809_1083
301.7
P10809_1097
416.1
Memory CD4 T-cell nTPM: 295.1
Samples: 6
Max nTPM: 328.4
Min nTPM: 177.7
P10809_1014
177.7
P10809_1026
306.1
P10809_1045
328.4
P10809_1064
321.5
P10809_1086
310.7
P10809_1113
326.0
Memory CD8 T-cell nTPM: 341.3
Samples: 5
Max nTPM: 427.8
Min nTPM: 225.6
P10809_1012
225.6
P10809_1027
352.3
P10809_1046
427.8
P10809_1065
363.9
P10809_1111
336.9
Naive CD4 T-cell nTPM: 240.4
Samples: 6
Max nTPM: 306.4
Min nTPM: 128.4
P10809_1015
128.4
P10809_1030
239.4
P10809_1049
306.4
P10809_1068
220.1
P10809_1085
275.3
P10809_1112
272.6
Naive CD8 T-cell nTPM: 280.2
Samples: 6
Max nTPM: 349.7
Min nTPM: 156.0
P10809_1016
156.0
P10809_1031
262.2
P10809_1050
282.2
P10809_1069
349.0
P10809_1087
349.7
P10809_1110
281.8
T-reg nTPM: 349.5
Samples: 6
Max nTPM: 499.9
Min nTPM: 259.7
P10809_1018
259.7
P10809_1037
320.3
P10809_1056
499.9
P10809_1075
343.8
P10809_1094
364.9
P10809_1106
308.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
265.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 169.7
Samples: 4
Max nTPM: 215.6
Min nTPM: 117.8
RHH5202_R3573
178.1
RHH5230_R3602
167.1
RHH5259_R3631
117.8
RHH5288_R3660
215.6
Effector memory CD8 T-cell nTPM: 222.5
Samples: 4
Max nTPM: 244.9
Min nTPM: 178.4
RHH5203_R3574
226.3
RHH5231_R3603
240.3
RHH5260_R3632
178.4
RHH5289_R3661
244.9
MAIT T-cell nTPM: 226.2
Samples: 4
Max nTPM: 273.6
Min nTPM: 161.5
RHH5233_R3605
273.6
RHH5205_R3576
161.5
RHH5262_R3634
222.0
RHH5297_R3663
247.5
Memory CD4 T-cell TFH nTPM: 197.3
Samples: 4
Max nTPM: 271.4
Min nTPM: 161.9
RHH5300_R3666
169.2
RHH5236_R3608
271.4
RHH5265_R3637
161.9
RHH5208_R3579
186.7
Memory CD4 T-cell Th1 nTPM: 156.4
Samples: 4
Max nTPM: 193.5
Min nTPM: 113.1
RHH5210_R3581
162.1
RHH5302_R3668
193.5
RHH5238_R3610
113.1
RHH5267_R3639
157.0
Memory CD4 T-cell Th1/Th17 nTPM: 189.5
Samples: 4
Max nTPM: 283.3
Min nTPM: 86.7
RHH5303_R3669
283.3
RHH5211_R3582
253.2
RHH5239_R3611
86.7
RHH5268_R3640
134.6
Memory CD4 T-cell Th17 nTPM: 169.5
Samples: 4
Max nTPM: 183.6
Min nTPM: 136.5
RHH5304_R3670
183.6
RHH5212_R3583
183.4
RHH5240_R3612
174.5
RHH5269_R3641
136.5
Memory CD4 T-cell Th2 nTPM: 201.4
Samples: 4
Max nTPM: 223.8
Min nTPM: 160.8
RHH5305_R3671
223.8
RHH5213_R3584
215.2
RHH5241_R3613
205.7
RHH5270_R3642
160.8
Naive CD4 T-cell nTPM: 152.1
Samples: 4
Max nTPM: 186.8
Min nTPM: 122.2
RHH5306_R3672
166.8
RHH5214_R3585
186.8
RHH5242_R3614
132.4
RHH5271_R3643
122.2
Naive CD8 T-cell nTPM: 137.3
Samples: 4
Max nTPM: 176.4
Min nTPM: 75.6
RHH5201_R3572
151.7
RHH5229_R3601
75.6
RHH5258_R3630
176.4
RHH5287_R3659
145.3
Non-Vd2 gdTCR nTPM: 265.0
Samples: 4
Max nTPM: 326.8
Min nTPM: 174.5
RHH5235_R3607
174.5
RHH5264_R3636
303.8
RHH5207_R3578
326.8
RHH5299_R3665
255.0
T-reg nTPM: 169.6
Samples: 4
Max nTPM: 231.3
Min nTPM: 131.6
RHH5301_R3667
157.5
RHH5237_R3609
231.3
RHH5266_R3638
131.6
RHH5209_R3580
158.0
Terminal effector memory CD4 T-cell nTPM: 203.7
Samples: 2
Max nTPM: 242.9
Min nTPM: 164.5
RHH5243_R3615
164.5
RHH5272_R3644
242.9
Terminal effector memory CD8 T-cell nTPM: 259.2
Samples: 4
Max nTPM: 282.7
Min nTPM: 224.7
RHH5232_R3604
249.0
RHH5204_R3575
282.7
RHH5261_R3633
224.7
RHH5296_R3662
280.5
Vd2 gdTCR nTPM: 250.5
Samples: 4
Max nTPM: 325.4
Min nTPM: 185.8
RHH5234_R3606
252.8
RHH5206_R3577
325.4
RHH5263_R3635
185.8
RHH5298_R3664
237.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.