We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
248.4
nTPM
Monaco:
204.4
nTPM
Schmiedel:
29.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
248.4
HPA sample
nTPM
gdT-cell nTPM: 248.5
Samples: 6
Max nTPM: 309.7
Min nTPM: 183.8
P10809_1007
186.1
P10809_1022
303.6
P10809_1041
309.7
P10809_1060
183.8
P10809_1077
284.6
P10809_1098
222.9
MAIT T-cell nTPM: 238.9
Samples: 6
Max nTPM: 299.1
Min nTPM: 162.3
P10809_1006
162.3
P10809_1024
230.6
P10809_1043
299.1
P10809_1062
243.0
P10809_1083
236.2
P10809_1097
262.3
Memory CD4 T-cell nTPM: 203.2
Samples: 6
Max nTPM: 239.9
Min nTPM: 160.4
P10809_1014
160.4
P10809_1026
239.9
P10809_1045
236.5
P10809_1064
201.8
P10809_1086
215.2
P10809_1113
165.1
Memory CD8 T-cell nTPM: 245.4
Samples: 5
Max nTPM: 299.1
Min nTPM: 193.3
P10809_1012
193.3
P10809_1027
277.4
P10809_1046
299.1
P10809_1065
256.6
P10809_1111
200.5
Naive CD4 T-cell nTPM: 176.2
Samples: 6
Max nTPM: 244.9
Min nTPM: 105.4
P10809_1015
105.4
P10809_1030
211.0
P10809_1049
244.9
P10809_1068
147.9
P10809_1085
194.2
P10809_1112
153.5
Naive CD8 T-cell nTPM: 196.1
Samples: 6
Max nTPM: 267.8
Min nTPM: 116.5
P10809_1016
116.5
P10809_1031
176.6
P10809_1050
253.7
P10809_1069
267.8
P10809_1087
212.1
P10809_1110
150.1
T-reg nTPM: 247.2
Samples: 6
Max nTPM: 426.7
Min nTPM: 155.0
P10809_1018
155.0
P10809_1037
206.3
P10809_1056
426.7
P10809_1075
235.2
P10809_1094
234.3
P10809_1106
225.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
204.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.7
Samples: 4
Max nTPM: 152.3
Min nTPM: 71.3
RHH5202_R3573
71.3
RHH5230_R3602
87.9
RHH5259_R3631
75.1
RHH5288_R3660
152.3
Effector memory CD8 T-cell nTPM: 110.9
Samples: 4
Max nTPM: 149.2
Min nTPM: 69.3
RHH5203_R3574
149.2
RHH5231_R3603
134.9
RHH5260_R3632
90.3
RHH5289_R3661
69.3
MAIT T-cell nTPM: 147.5
Samples: 4
Max nTPM: 205.1
Min nTPM: 95.7
RHH5233_R3605
162.4
RHH5205_R3576
95.7
RHH5262_R3634
126.9
RHH5297_R3663
205.1
Memory CD4 T-cell TFH nTPM: 117.1
Samples: 4
Max nTPM: 180.5
Min nTPM: 33.3
RHH5300_R3666
141.6
RHH5236_R3608
180.5
RHH5265_R3637
113.1
RHH5208_R3579
33.3
Memory CD4 T-cell Th1 nTPM: 117.0
Samples: 4
Max nTPM: 167.0
Min nTPM: 95.8
RHH5210_R3581
108.4
RHH5302_R3668
167.0
RHH5238_R3610
95.8
RHH5267_R3639
96.9
Memory CD4 T-cell Th1/Th17 nTPM: 110.5
Samples: 4
Max nTPM: 166.2
Min nTPM: 60.3
RHH5303_R3669
118.7
RHH5211_R3582
166.2
RHH5239_R3611
60.3
RHH5268_R3640
96.8
Memory CD4 T-cell Th17 nTPM: 88.3
Samples: 4
Max nTPM: 136.9
Min nTPM: 61.4
RHH5304_R3670
89.5
RHH5212_R3583
136.9
RHH5240_R3612
61.4
RHH5269_R3641
65.5
Memory CD4 T-cell Th2 nTPM: 107.9
Samples: 4
Max nTPM: 120.4
Min nTPM: 92.8
RHH5305_R3671
111.5
RHH5213_R3584
106.8
RHH5241_R3613
120.4
RHH5270_R3642
92.8
Naive CD4 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 121.8
Min nTPM: 70.9
RHH5306_R3672
120.2
RHH5214_R3585
121.8
RHH5242_R3614
103.7
RHH5271_R3643
70.9
Naive CD8 T-cell nTPM: 65.3
Samples: 4
Max nTPM: 121.0
Min nTPM: 17.8
RHH5201_R3572
17.8
RHH5229_R3601
46.7
RHH5258_R3630
121.0
RHH5287_R3659
75.5
Non-Vd2 gdTCR nTPM: 194.7
Samples: 4
Max nTPM: 341.1
Min nTPM: 114.2
RHH5235_R3607
114.2
RHH5264_R3636
193.5
RHH5207_R3578
129.9
RHH5299_R3665
341.1
T-reg nTPM: 112.3
Samples: 4
Max nTPM: 153.0
Min nTPM: 71.8
RHH5301_R3667
153.0
RHH5237_R3609
136.5
RHH5266_R3638
71.8
RHH5209_R3580
87.7
Terminal effector memory CD4 T-cell nTPM: 109.9
Samples: 2
Max nTPM: 139.6
Min nTPM: 80.1
RHH5243_R3615
80.1
RHH5272_R3644
139.6
Terminal effector memory CD8 T-cell nTPM: 204.4
Samples: 4
Max nTPM: 330.2
Min nTPM: 134.6
RHH5232_R3604
187.6
RHH5204_R3575
330.2
RHH5261_R3633
134.6
RHH5296_R3662
165.1
Vd2 gdTCR nTPM: 177.3
Samples: 4
Max nTPM: 273.3
Min nTPM: 94.5
RHH5234_R3606
133.4
RHH5206_R3577
273.3
RHH5263_R3635
94.5
RHH5298_R3664
208.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
