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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6.7
nTPM
Monaco:
601.9
nTPM
Schmiedel:
15.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6.7
HPA sample
nTPM
gdT-cell nTPM: 6.7
Samples: 6
Max nTPM: 14.4
Min nTPM: 3.8
P10809_1007
8.1
P10809_1022
4.2
P10809_1041
4.7
P10809_1060
14.4
P10809_1077
3.8
P10809_1098
4.8
MAIT T-cell nTPM: 2.4
Samples: 6
Max nTPM: 6.1
Min nTPM: 0.2
P10809_1006
2.8
P10809_1024
0.5
P10809_1043
1.5
P10809_1062
3.2
P10809_1083
6.1
P10809_1097
0.2
Memory CD4 T-cell nTPM: 5.6
Samples: 6
Max nTPM: 9.5
Min nTPM: 3.3
P10809_1014
3.3
P10809_1026
9.5
P10809_1045
6.0
P10809_1064
4.4
P10809_1086
3.9
P10809_1113
6.3
Memory CD8 T-cell nTPM: 4.4
Samples: 5
Max nTPM: 4.9
Min nTPM: 3.7
P10809_1012
4.9
P10809_1027
4.8
P10809_1046
3.7
P10809_1065
4.5
P10809_1111
4.0
Naive CD4 T-cell nTPM: 5.6
Samples: 6
Max nTPM: 9.7
Min nTPM: 2.5
P10809_1015
4.7
P10809_1030
4.2
P10809_1049
5.9
P10809_1068
2.5
P10809_1085
9.7
P10809_1112
6.3
Naive CD8 T-cell nTPM: 5.0
Samples: 6
Max nTPM: 9.3
Min nTPM: 1.3
P10809_1016
4.5
P10809_1031
6.6
P10809_1050
3.8
P10809_1069
1.3
P10809_1087
4.7
P10809_1110
9.3
T-reg nTPM: 3.2
Samples: 6
Max nTPM: 6.7
Min nTPM: 1.4
P10809_1018
6.7
P10809_1037
3.2
P10809_1056
1.4
P10809_1075
3.3
P10809_1094
1.8
P10809_1106
2.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
601.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 544.3
Samples: 4
Max nTPM: 618.2
Min nTPM: 490.4
RHH5202_R3573
618.2
RHH5230_R3602
496.5
RHH5259_R3631
572.0
RHH5288_R3660
490.4
Effector memory CD8 T-cell nTPM: 495.4
Samples: 4
Max nTPM: 592.8
Min nTPM: 338.2
RHH5203_R3574
338.2
RHH5231_R3603
524.8
RHH5260_R3632
525.6
RHH5289_R3661
592.8
MAIT T-cell nTPM: 423.1
Samples: 4
Max nTPM: 480.9
Min nTPM: 387.0
RHH5233_R3605
389.0
RHH5205_R3576
387.0
RHH5262_R3634
435.3
RHH5297_R3663
480.9
Memory CD4 T-cell TFH nTPM: 601.9
Samples: 4
Max nTPM: 693.1
Min nTPM: 541.2
RHH5300_R3666
622.4
RHH5236_R3608
541.2
RHH5265_R3637
693.1
RHH5208_R3579
550.8
Memory CD4 T-cell Th1 nTPM: 514.8
Samples: 4
Max nTPM: 643.9
Min nTPM: 411.8
RHH5210_R3581
526.8
RHH5302_R3668
476.6
RHH5238_R3610
643.9
RHH5267_R3639
411.8
Memory CD4 T-cell Th1/Th17 nTPM: 489.7
Samples: 4
Max nTPM: 523.0
Min nTPM: 445.0
RHH5303_R3669
521.9
RHH5211_R3582
445.0
RHH5239_R3611
523.0
RHH5268_R3640
468.8
Memory CD4 T-cell Th17 nTPM: 480.4
Samples: 4
Max nTPM: 546.6
Min nTPM: 444.6
RHH5304_R3670
546.6
RHH5212_R3583
444.6
RHH5240_R3612
459.4
RHH5269_R3641
470.9
Memory CD4 T-cell Th2 nTPM: 461.7
Samples: 4
Max nTPM: 532.1
Min nTPM: 406.8
RHH5305_R3671
532.1
RHH5213_R3584
459.1
RHH5241_R3613
448.6
RHH5270_R3642
406.8
Naive CD4 T-cell nTPM: 475.2
Samples: 4
Max nTPM: 512.5
Min nTPM: 435.3
RHH5306_R3672
435.3
RHH5214_R3585
512.5
RHH5242_R3614
498.2
RHH5271_R3643
454.8
Naive CD8 T-cell nTPM: 581.7
Samples: 4
Max nTPM: 762.5
Min nTPM: 503.0
RHH5201_R3572
514.9
RHH5229_R3601
762.5
RHH5258_R3630
546.5
RHH5287_R3659
503.0
Non-Vd2 gdTCR nTPM: 465.9
Samples: 4
Max nTPM: 590.1
Min nTPM: 346.6
RHH5235_R3607
451.9
RHH5264_R3636
590.1
RHH5207_R3578
346.6
RHH5299_R3665
475.0
T-reg nTPM: 491.7
Samples: 4
Max nTPM: 553.1
Min nTPM: 441.2
RHH5301_R3667
494.4
RHH5237_R3609
477.9
RHH5266_R3638
441.2
RHH5209_R3580
553.1
Terminal effector memory CD4 T-cell nTPM: 440.8
Samples: 2
Max nTPM: 451.7
Min nTPM: 429.8
RHH5243_R3615
451.7
RHH5272_R3644
429.8
Terminal effector memory CD8 T-cell nTPM: 430.1
Samples: 4
Max nTPM: 517.1
Min nTPM: 360.0
RHH5232_R3604
360.0
RHH5204_R3575
365.0
RHH5261_R3633
478.3
RHH5296_R3662
517.1
Vd2 gdTCR nTPM: 392.9
Samples: 4
Max nTPM: 473.8
Min nTPM: 275.7
RHH5234_R3606
392.0
RHH5206_R3577
275.7
RHH5263_R3635
473.8
RHH5298_R3664
430.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
