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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
151.7
nTPM
Monaco:
314.9
nTPM
Schmiedel:
26.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
151.7
HPA sample
nTPM
gdT-cell nTPM: 151.7
Samples: 6
Max nTPM: 188.0
Min nTPM: 112.7
P10809_1007
148.5
P10809_1022
188.0
P10809_1041
163.6
P10809_1060
112.7
P10809_1077
136.2
P10809_1098
161.4
MAIT T-cell nTPM: 112.5
Samples: 6
Max nTPM: 125.4
Min nTPM: 95.2
P10809_1006
114.8
P10809_1024
125.4
P10809_1043
117.8
P10809_1062
116.4
P10809_1083
95.2
P10809_1097
105.5
Memory CD4 T-cell nTPM: 34.4
Samples: 6
Max nTPM: 76.6
Min nTPM: 8.8
P10809_1014
10.2
P10809_1026
14.9
P10809_1045
25.9
P10809_1064
70.0
P10809_1086
76.6
P10809_1113
8.8
Memory CD8 T-cell nTPM: 93.0
Samples: 5
Max nTPM: 127.8
Min nTPM: 53.9
P10809_1012
53.9
P10809_1027
85.9
P10809_1046
118.8
P10809_1065
127.8
P10809_1111
78.4
Naive CD4 T-cell nTPM: 5.8
Samples: 6
Max nTPM: 28.7
Min nTPM: 0.5
P10809_1015
0.8
P10809_1030
0.9
P10809_1049
0.6
P10809_1068
3.2
P10809_1085
28.7
P10809_1112
0.5
Naive CD8 T-cell nTPM: 53.5
Samples: 6
Max nTPM: 126.2
Min nTPM: 8.7
P10809_1016
8.7
P10809_1031
20.7
P10809_1050
54.8
P10809_1069
90.9
P10809_1087
126.2
P10809_1110
19.5
T-reg nTPM: 2.3
Samples: 6
Max nTPM: 10.2
Min nTPM: 0.0
P10809_1018
1.3
P10809_1037
0.0
P10809_1056
10.2
P10809_1075
0.3
P10809_1094
1.8
P10809_1106
0.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
314.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.1
Samples: 4
Max nTPM: 63.4
Min nTPM: 17.2
RHH5202_R3573
29.0
RHH5230_R3602
63.4
RHH5259_R3631
17.2
RHH5288_R3660
30.6
Effector memory CD8 T-cell nTPM: 193.3
Samples: 4
Max nTPM: 274.5
Min nTPM: 147.0
RHH5203_R3574
162.8
RHH5231_R3603
189.0
RHH5260_R3632
147.0
RHH5289_R3661
274.5
MAIT T-cell nTPM: 314.9
Samples: 4
Max nTPM: 446.5
Min nTPM: 253.0
RHH5233_R3605
289.2
RHH5205_R3576
446.5
RHH5262_R3634
270.9
RHH5297_R3663
253.0
Memory CD4 T-cell TFH nTPM: 8.4
Samples: 4
Max nTPM: 13.5
Min nTPM: 0.0
RHH5300_R3666
11.5
RHH5236_R3608
0.0
RHH5265_R3637
8.6
RHH5208_R3579
13.5
Memory CD4 T-cell Th1 nTPM: 29.9
Samples: 4
Max nTPM: 43.0
Min nTPM: 21.9
RHH5210_R3581
27.1
RHH5302_R3668
21.9
RHH5238_R3610
27.6
RHH5267_R3639
43.0
Memory CD4 T-cell Th1/Th17 nTPM: 70.5
Samples: 4
Max nTPM: 110.4
Min nTPM: 35.4
RHH5303_R3669
88.3
RHH5211_R3582
110.4
RHH5239_R3611
35.4
RHH5268_R3640
47.8
Memory CD4 T-cell Th17 nTPM: 38.5
Samples: 4
Max nTPM: 73.4
Min nTPM: 5.1
RHH5304_R3670
73.4
RHH5212_R3583
50.8
RHH5240_R3612
5.1
RHH5269_R3641
24.5
Memory CD4 T-cell Th2 nTPM: 7.5
Samples: 4
Max nTPM: 14.8
Min nTPM: 4.2
RHH5305_R3671
4.2
RHH5213_R3584
14.8
RHH5241_R3613
6.6
RHH5270_R3642
4.3
Naive CD4 T-cell nTPM: 7.0
Samples: 4
Max nTPM: 11.2
Min nTPM: 4.5
RHH5306_R3672
7.1
RHH5214_R3585
11.2
RHH5242_R3614
5.2
RHH5271_R3643
4.5
Naive CD8 T-cell nTPM: 0.5
Samples: 4
Max nTPM: 1.7
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
1.7
RHH5258_R3630
0.0
RHH5287_R3659
0.3
Non-Vd2 gdTCR nTPM: 253.1
Samples: 4
Max nTPM: 333.4
Min nTPM: 184.1
RHH5235_R3607
267.2
RHH5264_R3636
184.1
RHH5207_R3578
333.4
RHH5299_R3665
227.8
T-reg nTPM: 9.8
Samples: 4
Max nTPM: 12.5
Min nTPM: 7.4
RHH5301_R3667
8.6
RHH5237_R3609
12.5
RHH5266_R3638
7.4
RHH5209_R3580
10.5
Terminal effector memory CD4 T-cell nTPM: 282.4
Samples: 2
Max nTPM: 317.2
Min nTPM: 247.5
RHH5243_R3615
317.2
RHH5272_R3644
247.5
Terminal effector memory CD8 T-cell nTPM: 258.6
Samples: 4
Max nTPM: 301.3
Min nTPM: 214.4
RHH5232_R3604
301.3
RHH5204_R3575
214.4
RHH5261_R3633
224.0
RHH5296_R3662
294.7
Vd2 gdTCR nTPM: 237.3
Samples: 4
Max nTPM: 311.5
Min nTPM: 199.6
RHH5234_R3606
235.9
RHH5206_R3577
311.5
RHH5263_R3635
199.6
RHH5298_R3664
202.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
