HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.2 nTPM
HPA Brain:47.4 nTPM
GTEx:12.2 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:59.7 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.5
1898 Male, age 80, left hemisphere 43.7
1855 Male, age 76, left hemisphere 31.8
2148 Female, age 91, left hemisphere 27.4
2621 Female, age 67, right hemisphere 26.3
1911 Female, age 85, right hemisphere 24.1
2529 Female, age 94, left hemisphere 23.4
Dentate gyrus
nTPM: 30.4
1927 Female, age 91, both hemispheres 39.5
2010 Male, age 76, both hemispheres 35.1
2528 Male, age 74, both hemispheres 29.6
2246 Female, age 85, both hemispheres 28.5
2530 Female, age 94, left hemisphere 25.2
2531 Female, age 67, both hemispheres 24.2
Entorhinal gyrus
nTPM: 36.0
1938 Female, age 85, left hemisphere 44.4
2613 Female, age 94, left hemisphere 43.4
2764 Male, age 80, right hemisphere 40.3
1787 Male, age 76, left hemisphere 35.2
2117 Female, age 91, right hemisphere 27.8
2686 Male, age 75, right hemisphere 24.9
Hippocampus, CA1
nTPM: 32.5
2749 Male, age 80, left hemisphere 36.3
2045 Male, age 76, both hemispheres 35.3
1873 Female, age 85, both hemispheres 33.4
2527 Male, age 74, both hemispheres 30.6
2082 Female, age 91, right hemisphere 27.0
Hippocampus, CA2
nTPM: 30.8
1892 Male, age 76, both hemispheres 42.1
1963 Male, age 80, left hemisphere 34.4
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 27.8
2113 Female, age 91, right hemisphere 26.8
2249 Male, age 74, both hemispheres 23.5
Hippocampus, CA3
nTPM: 30.9
2620 Female, age 94, left hemisphere 37.3
1867 Male, age 76, both hemispheres 31.2
1891 Female, age 85, both hemispheres 30.8
2436 Male, age 74, both hemispheres 29.4
2137 Male, age 80, left hemisphere 28.6
2861 Female, age 67, both hemispheres 28.3
Parahippocampal cortex
nTPM: 34.1
1850 Male, age 80, both hemispheres 46.5
1990 Female, age 91, right hemisphere 38.5
1933 Female, age 85, both hemispheres 38.4
2250 Female, age 67, right hemisphere 38.0
2693 Female, age 94, both hemispheres 35.8
2245 Female, age 91, both hemispheres 32.7
2018 Male, age 76, both hemispheres 30.7
2532 Female, age 72, left hemisphere 27.1
2692 Male, age 74, both hemispheres 26.9
2622 Female, age 67, right hemisphere 26.0
Perirhinal gyrus
nTPM: 47.4
1847 Female, age 91, left hemisphere 70.8
1794 Male, age 80, right hemisphere 43.8
2521 Female, age 94, right hemisphere 43.7
1841 Female, age 85, right hemisphere 42.5
2848 Male, age 76, right hemisphere 36.0
Subiculum
nTPM: 28.8
1977 Female, age 85, both hemispheres 40.4
2438 Female, age 94, left hemisphere 36.4
2729 Female, age 91, right hemisphere 27.6
1901 Male, age 80, both hemispheres 25.9
2619 Male, age 74, both hemispheres 23.4
2042 Male, age 76, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 27.0
Min nTPM: 3.7
Std nTPM: 5.0
Median nTPM: 11.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 25.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 23.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 23.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 23.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 23.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 22.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 22.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 37.1
Min nTPM: 23.1
Sample A Female 37.1
Sample B Female 26.1
Sample C Male 26.6
Sample D Male 23.1
Dorsal hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 33.4
Min nTPM: 22.3
Sample A Female 33.4
Sample B Female 27.3
Sample C Male 27.0
Sample D Male 22.3
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.9
Min nTPM: 19.3
Sample A Female 23.9
Sample B Female 20.9
Sample C Male 21.4
Sample D Male 19.3
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 21.3
Sample A Female 31.0
Sample B Female 21.3
Sample C Male 26.2
Sample D Male 27.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.7
Samples: 4

Max nTPM: 65.4
Min nTPM: 52.6
Sample A Male 52.6
Sample B Male 65.4
Sample C Female 60.6
Sample D Female 60.2
Hippocampal formation
nTPM: 48.4
Samples: 4

Max nTPM: 59.5
Min nTPM: 41.0
Sample A Male 59.5
Sample B Male 46.6
Sample C Female 41.0
Sample D Female 46.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68076555 Antisense, RP_040923_02_G04, Mouse strain C57BL/6J (56 days, male) 1.3

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