We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
183.9
nTPM
FANTOM5:
123.6
Scaled Tags Per Million
Pig:
56.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
183.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 156.1
2188
Female, age 91, both hemispheres
179.6
2090
Male, age 80, both hemispheres
167.6
2301
Female, age 85, both hemispheres
142.9
1984
Male, age 76, both hemispheres
134.2
Dorsal cochlear nucleus nTPM: 163.9
2058
Male, age 76, both hemispheres
170.9
2370
Male, age 61, both hemispheres
167.1
2802
Male, age 74, right hemisphere
164.5
2378
Male, age 80, both hemispheres
162.4
2187
Female, age 91, both hemispheres
154.7
Dorsal tegmental nucleus nTPM: 153.6
2083
Male, age 80, both hemispheres
169.1
2326
Male, age 74, both hemispheres
166.1
1936
Male, age 76, left hemisphere
158.0
2358
Male, age 61, both hemispheres
121.1
Dorsolateral tegmental area nTPM: 161.6
2751
Female, age 85, both hemispheres
175.2
2654
Male, age 80, both hemispheres
173.3
2337
Male, age 61, both hemispheres
156.1
2360
Male, age 74, both hemispheres
156.0
2141
Male, age 76, both hemispheres
147.4
Kolliker-Fuse nucleus nTPM: 160.6
2793
Female, age 91, left hemisphere
172.6
2315
Male, age 76, right hemisphere
159.4
2163
Male, age 80, both hemispheres
149.7
Lateral lemniscal nuclei nTPM: 151.6
2320
Female, age 91, left hemisphere
175.3
2036
Male, age 80, both hemispheres
157.3
2453
Male, age 74, right hemisphere
152.0
2746
Female, age 85, left hemisphere
146.6
2169
Male, age 76, both hemispheres
126.8
Lateral parabrachial nucleus nTPM: 171.4
2792
Male, age 76, both hemispheres
198.6
2013
Male, age 80, both hemispheres
170.1
2790
Male, age 61, both hemispheres
169.5
2139
Female, age 85, right hemisphere
147.4
Lateral vestibular nucleus nTPM: 147.3
2184
Male, age 76, both hemispheres
160.6
2311
Male, age 80, both hemispheres
134.1
Locus coeruleus nTPM: 130.8
2317
Female, age 72, unknown
139.5
2788
Male, age 74, unknown
139.1
2720
Male, age 74, both hemispheres
136.6
2162
Male, age 80, both hemispheres
133.7
2014
Male, age 55, unknown
130.6
2123
Female, age 91, both hemispheres
122.6
1980
Male, age 76, both hemispheres
113.6
Medial parabrachial nucleus nTPM: 154.1
2463
Female, age 85, right hemisphere
166.1
2786
Male, age 76, both hemispheres
157.0
2170
Female, age 91, both hemispheres
155.6
2156
Male, age 61, both hemispheres
150.5
2854
Male, age 80, both hemispheres
141.5
Medial periolivary nuclei nTPM: 151.8
2081
Male, age 80, both hemispheres
179.5
2458
Female, age 91, both hemispheres
166.0
2791
Male, age 74, right hemisphere
153.5
2063
Male, age 76, both hemispheres
135.2
2171
Female, age 85, both hemispheres
124.9
Motor facial nucleus nTPM: 152.2
2126
Male, age 61, both hemispheres
181.2
2697
Female, age 85, both hemispheres
169.7
2365
Male, age 74, right hemisphere
149.5
2795
Female, age 91, both hemispheres
142.6
2327
Male, age 80, both hemispheres
138.7
2062
Male, age 76, both hemispheres
131.5
Motor trigeminal nucleus nTPM: 160.1
2321
Female, age 91, both hemispheres
168.7
2560
Male, age 74, both hemispheres
166.5
2079
Male, age 80, both hemispheres
161.4
2309
Male, age 76, both hemispheres
159.3
2335
Male, age 61, both hemispheres
144.7
Nuclei of the trapezoid body nTPM: 148.9
2166
Male, age 80, both hemispheres
172.4
2368
Female, age 91, both hemispheres
159.8
2159
Male, age 61, both hemispheres
153.4
1983
Male, age 76, both hemispheres
130.9
2735
Female, age 85, both hemispheres
128.1
Nucleus raphe magnus nTPM: 140.7
2459
Female, age 91, both hemispheres
166.6
2328
Male, age 80, both hemispheres
157.6
2051
Male, age 76, both hemispheres
150.8
2455
Male, age 74, both hemispheres
137.2
2172
Female, age 85, both hemispheres
117.2
2160
Male, age 61, both hemispheres
114.7
Paramedian reticular nucleus nTPM: 157.2
2052
Male, age 76, both hemispheres
182.5
2057
Male, age 80, both hemispheres
162.9
2313
Male, age 61, both hemispheres
144.0
2050
Female, age 85, both hemispheres
139.4
Pedunculopontine tegmental nucleus nTPM: 148.9
2338
Male, age 61, both hemispheres
152.6
1921
Female, age 85, both hemispheres
147.9
2334
Male, age 80, both hemispheres
146.2
Pontine nuclei nTPM: 163.7
2454
Male, age 74, left hemisphere
200.3
2319
Female, age 91, both hemispheres
182.9
2115
Male, age 80, left hemisphere
182.7
1863
Male, age 55, unknown
161.8
1968
Male, age 76, left hemisphere
158.1
2109
Female, age 72, unknown
148.5
2787
Female, age 85, both hemispheres
142.2
2727
Male, age 61, right hemisphere
133.1
Pontine raphe nucleus nTPM: 145.7
2122
Female, age 85, midline
148.2
2853
Male, age 76, midline
143.2
Posteroventral cochlear nucleus nTPM: 183.9
2135
Female, age 91, both hemispheres
227.0
2341
Male, age 80, both hemispheres
185.3
2070
Male, age 76, both hemispheres
182.2
2371
Male, age 61, both hemispheres
181.2
2752
Female, age 85, both hemispheres
143.6
Principal sensory trigeminal nucleus nTPM: 150.9
2367
Female, age 91, left hemisphere
170.0
2324
Male, age 76, both hemispheres
154.0
2008
Male, age 80, left hemisphere
144.5
2158
Male, age 61, both hemispheres
135.2
Reticular pontine nucleus, caudal nTPM: 170.1
2559
Male, age 74, both hemispheres
180.2
2457
Female, age 91, both hemispheres
176.7
2092
Male, age 76, both hemispheres
168.7
2332
Male, age 80, right hemisphere
154.6
Reticular pontine nucleus, oral nTPM: 176.7
2366
Female, age 91, both hemispheres
208.6
2361
Male, age 74, both hemispheres
172.2
1939
Male, age 80, both hemispheres
170.3
2167
Male, age 76, both hemispheres
169.5
2012
Female, age 85, both hemispheres
163.1
Reticulotegmental nucleus nTPM: 151.8
2452
Male, age 74, both hemispheres
172.8
2322
Female, age 91, both hemispheres
150.2
2333
Male, age 80, both hemispheres
149.3
2325
Male, age 76, both hemispheres
134.8
Spinal trigeminal nucleus, oral nTPM: 148.1
1978
Male, age 76, both hemispheres
159.8
2737
Female, age 85, both hemispheres
143.2
2164
Male, age 80, both hemispheres
141.3
Subcoeruleus area nTPM: 163.8
2369
Female, age 85, left hemisphere
193.0
2451
Male, age 74, both hemispheres
188.2
2089
Male, age 76, left hemisphere
159.3
2323
Female, age 91, left hemisphere
139.9
1958
Male, age 80, both hemispheres
138.5
Superior olive nTPM: 161.4
2020
Male, age 76, both hemispheres
172.8
2364
Male, age 74, right hemisphere
169.4
2561
Female, age 91, both hemispheres
160.9
2329
Male, age 80, right hemisphere
155.1
1875
Female, age 85, both hemispheres
149.1
Ventral periolivary nuclei nTPM: 151.0
2023
Male, age 76, both hemispheres
188.4
2794
Female, age 91, left hemisphere
148.3
2165
Male, age 80, both hemispheres
143.1
2130
Female, age 85, both hemispheres
124.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 154.6
2456
Female, age 91, both hemispheres
176.5
2359
Male, age 61, both hemispheres
161.9
1959
Male, age 76, both hemispheres
152.2
2161
Male, age 80, both hemispheres
151.3
2840
Female, age 85, both hemispheres
145.4
2449
Male, age 74, both hemispheres
140.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
