HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:78.7 nTPM
HPA Brain:192.1 nTPM
GTEx:78.7 nTPM
FANTOM5:130.0 Scaled Tags Per Million
Pig:67.4 nTPM
Mouse:51.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001842Antibody CAB004036
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 192.1
Sample id Sample description nTPM
Hippocampus
nTPM: 180.7
2148 Female, age 91, left hemisphere 199.6
1911 Female, age 85, right hemisphere 189.3
2529 Female, age 94, left hemisphere 186.5
1898 Male, age 80, left hemisphere 182.7
1855 Male, age 76, left hemisphere 166.8
2621 Female, age 67, right hemisphere 159.5
Dentate gyrus
nTPM: 186.1
2530 Female, age 94, left hemisphere 206.6
2246 Female, age 85, both hemispheres 192.9
2528 Male, age 74, both hemispheres 186.2
1927 Female, age 91, both hemispheres 178.0
2010 Male, age 76, both hemispheres 177.4
2531 Female, age 67, both hemispheres 175.8
Entorhinal gyrus
nTPM: 177.0
2764 Male, age 80, right hemisphere 213.6
2117 Female, age 91, right hemisphere 197.2
1938 Female, age 85, left hemisphere 181.2
2686 Male, age 75, right hemisphere 171.7
2613 Female, age 94, left hemisphere 159.4
1787 Male, age 76, left hemisphere 139.2
Hippocampus, CA1
nTPM: 192.1
2045 Male, age 76, both hemispheres 213.5
2082 Female, age 91, right hemisphere 200.1
1873 Female, age 85, both hemispheres 199.7
2749 Male, age 80, left hemisphere 182.4
2527 Male, age 74, both hemispheres 164.8
Hippocampus, CA2
nTPM: 176.3
1963 Male, age 80, left hemisphere 207.7
2113 Female, age 91, right hemisphere 190.4
1940 Female, age 85, left hemisphere 170.0
2437 Female, age 94, left hemisphere 166.6
2249 Male, age 74, both hemispheres 165.0
1892 Male, age 76, both hemispheres 158.1
Hippocampus, CA3
nTPM: 184.5
1891 Female, age 85, both hemispheres 230.7
2620 Female, age 94, left hemisphere 192.9
2137 Male, age 80, left hemisphere 184.4
2861 Female, age 67, both hemispheres 177.3
1867 Male, age 76, both hemispheres 170.8
2436 Male, age 74, both hemispheres 150.8
Parahippocampal cortex
nTPM: 175.1
1850 Male, age 80, both hemispheres 210.3
2018 Male, age 76, both hemispheres 194.1
2532 Female, age 72, left hemisphere 191.7
2692 Male, age 74, both hemispheres 188.9
2693 Female, age 94, both hemispheres 183.2
1933 Female, age 85, both hemispheres 182.2
1990 Female, age 91, right hemisphere 176.7
2250 Female, age 67, right hemisphere 150.9
2245 Female, age 91, both hemispheres 143.4
2622 Female, age 67, right hemisphere 129.2
Perirhinal gyrus
nTPM: 173.6
2521 Female, age 94, right hemisphere 186.1
1794 Male, age 80, right hemisphere 180.8
1841 Female, age 85, right hemisphere 173.2
1847 Female, age 91, left hemisphere 172.0
2848 Male, age 76, right hemisphere 155.7
Subiculum
nTPM: 181.2
2042 Male, age 76, both hemispheres 199.1
1901 Male, age 80, both hemispheres 195.4
1977 Female, age 85, both hemispheres 189.8
2729 Female, age 91, right hemisphere 187.9
2619 Male, age 74, both hemispheres 160.4
2438 Female, age 94, left hemisphere 154.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.7
Samples: 197

Max nTPM: 231.7
Min nTPM: 37.0
Std nTPM: 31.2
Median nTPM: 71.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 231.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 209.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 182.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 166.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 159.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 159.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 145.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 145.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 145.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 143.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 142.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.0
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 114.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.4
Pig sample Sample description nTPM
Subiculum
nTPM: 54.1
Samples: 4

Max nTPM: 71.3
Min nTPM: 43.1
Sample A Female 71.3
Sample B Female 53.2
Sample C Male 48.8
Sample D Male 43.1
Dorsal hippocampus
nTPM: 67.4
Samples: 4

Max nTPM: 78.6
Min nTPM: 58.9
Sample A Female 78.6
Sample B Female 69.8
Sample C Male 62.3
Sample D Male 58.9
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 65.8
Min nTPM: 51.5
Sample A Female 59.0
Sample B Female 65.8
Sample C Male 51.5
Sample D Male 57.8
Ventral hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 78.4
Min nTPM: 49.3
Sample A Female 60.4
Sample B Female 49.3
Sample C Male 64.0
Sample D Male 78.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 47.8
Sample A Male 53.7
Sample B Male 55.4
Sample C Female 49.1
Sample D Female 47.8
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 47.2
Min nTPM: 43.6
Sample A Male 43.6
Sample B Male 47.2
Sample C Female 47.1
Sample D Female 44.0

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