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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
11722.3
nTPM
Monaco:
1062.2
nTPM
Schmiedel:
2798.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
11722.3
HPA sample
nTPM
gdT-cell nTPM: 6626.5
Samples: 6
Max nTPM: 8431.6
Min nTPM: 5255.9
P10809_1007
5255.9
P10809_1022
6011.9
P10809_1041
8431.6
P10809_1060
5881.0
P10809_1077
6764.6
P10809_1098
7413.8
MAIT T-cell nTPM: 5333.0
Samples: 6
Max nTPM: 7053.9
Min nTPM: 3001.9
P10809_1006
3001.9
P10809_1024
5292.9
P10809_1043
6496.6
P10809_1062
4954.9
P10809_1083
5197.7
P10809_1097
7053.9
Memory CD4 T-cell nTPM: 8205.7
Samples: 6
Max nTPM: 8934.8
Min nTPM: 5911.4
P10809_1014
5911.4
P10809_1026
8835.4
P10809_1045
8918.6
P10809_1064
8934.8
P10809_1086
8553.7
P10809_1113
8080.1
Memory CD8 T-cell nTPM: 6533.6
Samples: 5
Max nTPM: 8132.5
Min nTPM: 4561.3
P10809_1012
4561.3
P10809_1027
6513.4
P10809_1046
7501.7
P10809_1065
8132.5
P10809_1111
5959.2
Naive CD4 T-cell nTPM: 5514.4
Samples: 6
Max nTPM: 6764.3
Min nTPM: 3731.7
P10809_1015
3731.7
P10809_1030
6086.3
P10809_1049
6764.3
P10809_1068
4924.0
P10809_1085
5755.5
P10809_1112
5824.4
Naive CD8 T-cell nTPM: 5683.6
Samples: 6
Max nTPM: 7525.5
Min nTPM: 3864.7
P10809_1016
3864.7
P10809_1031
5146.1
P10809_1050
5641.6
P10809_1069
7525.5
P10809_1087
7107.3
P10809_1110
4816.4
T-reg nTPM: 11722.3
Samples: 6
Max nTPM: 15651.1
Min nTPM: 7724.9
P10809_1018
7724.9
P10809_1037
12649.4
P10809_1056
15651.1
P10809_1075
10433.5
P10809_1094
12354.7
P10809_1106
11520.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1062.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 594.8
Samples: 4
Max nTPM: 936.8
Min nTPM: 356.0
RHH5202_R3573
356.0
RHH5230_R3602
540.4
RHH5259_R3631
936.8
RHH5288_R3660
545.9
Effector memory CD8 T-cell nTPM: 619.5
Samples: 4
Max nTPM: 1087.3
Min nTPM: 448.0
RHH5203_R3574
448.0
RHH5231_R3603
460.0
RHH5260_R3632
1087.3
RHH5289_R3661
482.8
MAIT T-cell nTPM: 512.6
Samples: 4
Max nTPM: 759.0
Min nTPM: 302.6
RHH5233_R3605
302.6
RHH5205_R3576
759.0
RHH5262_R3634
510.9
RHH5297_R3663
477.7
Memory CD4 T-cell TFH nTPM: 569.8
Samples: 4
Max nTPM: 908.9
Min nTPM: 398.5
RHH5300_R3666
491.4
RHH5236_R3608
908.9
RHH5265_R3637
480.3
RHH5208_R3579
398.5
Memory CD4 T-cell Th1 nTPM: 966.7
Samples: 4
Max nTPM: 1660.0
Min nTPM: 301.3
RHH5210_R3581
301.3
RHH5302_R3668
814.7
RHH5238_R3610
1660.0
RHH5267_R3639
1090.8
Memory CD4 T-cell Th1/Th17 nTPM: 854.6
Samples: 4
Max nTPM: 1220.8
Min nTPM: 575.1
RHH5303_R3669
696.7
RHH5211_R3582
575.1
RHH5239_R3611
925.6
RHH5268_R3640
1220.8
Memory CD4 T-cell Th17 nTPM: 774.8
Samples: 4
Max nTPM: 1011.0
Min nTPM: 455.6
RHH5304_R3670
1011.0
RHH5212_R3583
455.6
RHH5240_R3612
886.2
RHH5269_R3641
746.3
Memory CD4 T-cell Th2 nTPM: 746.0
Samples: 4
Max nTPM: 1173.1
Min nTPM: 423.7
RHH5305_R3671
1173.1
RHH5213_R3584
690.3
RHH5241_R3613
423.7
RHH5270_R3642
696.9
Naive CD4 T-cell nTPM: 609.8
Samples: 4
Max nTPM: 820.9
Min nTPM: 384.2
RHH5306_R3672
652.7
RHH5214_R3585
820.9
RHH5242_R3614
384.2
RHH5271_R3643
581.4
Naive CD8 T-cell nTPM: 488.4
Samples: 4
Max nTPM: 830.7
Min nTPM: 222.4
RHH5201_R3572
222.4
RHH5229_R3601
830.7
RHH5258_R3630
298.4
RHH5287_R3659
602.2
Non-Vd2 gdTCR nTPM: 509.5
Samples: 4
Max nTPM: 739.6
Min nTPM: 418.7
RHH5235_R3607
739.6
RHH5264_R3636
423.4
RHH5207_R3578
418.7
RHH5299_R3665
456.3
T-reg nTPM: 753.5
Samples: 4
Max nTPM: 902.8
Min nTPM: 590.2
RHH5301_R3667
676.0
RHH5237_R3609
590.2
RHH5266_R3638
844.8
RHH5209_R3580
902.8
Terminal effector memory CD4 T-cell nTPM: 716.7
Samples: 2
Max nTPM: 849.4
Min nTPM: 584.0
RHH5243_R3615
849.4
RHH5272_R3644
584.0
Terminal effector memory CD8 T-cell nTPM: 917.1
Samples: 4
Max nTPM: 1802.8
Min nTPM: 290.3
RHH5232_R3604
290.3
RHH5204_R3575
976.9
RHH5261_R3633
1802.8
RHH5296_R3662
598.2
Vd2 gdTCR nTPM: 1062.3
Samples: 4
Max nTPM: 2336.3
Min nTPM: 372.4
RHH5234_R3606
372.4
RHH5206_R3577
2336.3
RHH5263_R3635
943.0
RHH5298_R3664
597.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.