PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:15.5 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:6.6 nTPM
Allen mouse:0.2 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 13.3
2301 Female, age 85, both hemispheres 14.3
2188 Female, age 91, both hemispheres 13.9
1984 Male, age 76, both hemispheres 13.4
2090 Male, age 80, both hemispheres 11.6
Area postrema
nTPM: 13.5
2054 Male, age 76, both hemispheres 14.4
2799 Male, age 61, both hemispheres 13.4
2306 Male, age 80, both hemispheres 12.8
Dorsal cochlear nucleus
nTPM: 12.5
2378 Male, age 80, both hemispheres 13.9
2187 Female, age 91, both hemispheres 13.6
2058 Male, age 76, both hemispheres 12.6
2370 Male, age 61, both hemispheres 11.6
2802 Male, age 74, right hemisphere 10.9
Dorsal medullary reticular nucleus
nTPM: 12.3
2040 Female, age 85, both hemispheres 13.3
2373 Male, age 61, both hemispheres 11.8
2088 Male, age 76, both hemispheres 11.7
Dorsal motor vagal complex
nTPM: 12.4
2185 Male, age 76, both hemispheres 13.6
2000 Male, age 74, unknown 13.1
2133 Female, age 91, both hemispheres 12.8
2844 Male, age 55, unknown 12.8
2807 Female, age 85, both hemispheres 12.7
2813 Female, age 72, unknown 12.7
2797 Male, age 61, both hemispheres 11.2
2643 Male, age 74, both hemispheres 10.5
Dorsal tegmental nucleus
nTPM: 12.3
2326 Male, age 74, both hemispheres 13.3
1936 Male, age 76, left hemisphere 12.8
2358 Male, age 61, both hemispheres 12.3
2083 Male, age 80, both hemispheres 10.9
Dorsolateral tegmental area
nTPM: 13.0
2360 Male, age 74, both hemispheres 16.1
2654 Male, age 80, both hemispheres 12.9
2751 Female, age 85, both hemispheres 12.6
2141 Male, age 76, both hemispheres 12.5
2337 Male, age 61, both hemispheres 11.1
Gigantocellular reticular nuclei, medullary
nTPM: 13.7
2314 Male, age 61, both hemispheres 14.9
2387 Female, age 91, both hemispheres 14.5
2022 Male, age 76, right hemisphere 13.6
2310 Male, age 80, both hemispheres 13.5
1876 Female, age 85, both hemispheres 13.3
2462 Male, age 74, both hemispheres 12.7
Gigantocellular reticular nuclei, pars
nTPM: 13.5
2168 Male, age 76, both hemispheres 16.6
2330 Male, age 80, both hemispheres 13.4
2336 Male, age 61, both hemispheres 13.2
2706 Male, age 80, both hemispheres 12.8
2084 Female, age 85, both hemispheres 11.7
Inferior olive
nTPM: 12.8
2085 Female, age 85, both hemispheres 14.0
2628 Female, age 91, both hemispheres 13.3
2178 Male, age 61, both hemispheres 13.2
2563 Male, age 74, both hemispheres 12.1
2379 Male, age 80, both hemispheres 11.5
Kolliker-Fuse nucleus
nTPM: 12.7
2315 Male, age 76, right hemisphere 14.2
2163 Male, age 80, both hemispheres 12.3
2793 Female, age 91, left hemisphere 11.6
Lateral lemniscal nuclei
nTPM: 14.1
2169 Male, age 76, both hemispheres 15.5
2746 Female, age 85, left hemisphere 14.3
2453 Male, age 74, right hemisphere 14.0
2036 Male, age 80, both hemispheres 13.5
2320 Female, age 91, left hemisphere 13.2
Lateral medullary reticular nucleus
nTPM: 13.3
2305 Male, age 74, both hemispheres 15.0
2374 Male, age 61, both hemispheres 14.3
2044 Male, age 76, both hemispheres 13.9
2190 Female, age 85, both hemispheres 13.0
2804 Female, age 91, both hemispheres 12.5
2852 Male, age 80, both hemispheres 11.1
Lateral parabrachial nucleus
nTPM: 13.7
2139 Female, age 85, right hemisphere 14.1
2013 Male, age 80, both hemispheres 13.9
2792 Male, age 76, both hemispheres 13.7
2790 Male, age 61, both hemispheres 13.1
Lateral vestibular nucleus
nTPM: 12.6
2311 Male, age 80, both hemispheres 13.6
2184 Male, age 76, both hemispheres 11.7
Locus coeruleus
nTPM: 11.8
2788 Male, age 74, unknown 13.6
2720 Male, age 74, both hemispheres 12.9
2014 Male, age 55, unknown 12.4
2162 Male, age 80, both hemispheres 12.0
2317 Female, age 72, unknown 11.6
1980 Male, age 76, both hemispheres 10.4
2123 Female, age 91, both hemispheres 9.5
Medial olivary nucleus
nTPM: 14.6
1962 Male, age 76, both hemispheres 16.8
2138 Female, age 91, both hemispheres 15.0
1943 Male, age 61, both hemispheres 14.5
2851 Male, age 80, both hemispheres 12.4
Medial parabrachial nucleus
nTPM: 12.8
2854 Male, age 80, both hemispheres 14.8
2463 Female, age 85, right hemisphere 13.2
2170 Female, age 91, both hemispheres 13.1
2156 Male, age 61, both hemispheres 11.6
2786 Male, age 76, both hemispheres 11.1
Medial periolivary nuclei
nTPM: 14.7
2063 Male, age 76, both hemispheres 17.1
2171 Female, age 85, both hemispheres 15.6
2081 Male, age 80, both hemispheres 14.1
2458 Female, age 91, both hemispheres 13.7
2791 Male, age 74, right hemisphere 13.3
Medial vestibular nucleus
nTPM: 12.3
2801 Male, age 74, both hemispheres 13.8
2803 Female, age 91, both hemispheres 13.6
2743 Female, age 85, both hemispheres 13.5
2093 Male, age 80, both hemispheres 11.9
2134 Male, age 76, both hemispheres 11.2
2624 Male, age 61, both hemispheres 10.0
Motor facial nucleus
nTPM: 13.9
2327 Male, age 80, both hemispheres 15.6
2062 Male, age 76, both hemispheres 15.3
2365 Male, age 74, right hemisphere 14.0
2697 Female, age 85, both hemispheres 13.8
2126 Male, age 61, both hemispheres 12.5
2795 Female, age 91, both hemispheres 12.2
Motor hypoglossal nucleus
nTPM: 12.7
2461 Male, age 61, both hemispheres 15.5
2277 Male, age 76, both hemispheres 13.6
2125 Female, age 91, both hemispheres 12.3
2132 Female, age 85, both hemispheres 11.9
2182 Male, age 80, both hemispheres 9.9
Motor trigeminal nucleus
nTPM: 12.9
2079 Male, age 80, both hemispheres 15.9
2309 Male, age 76, both hemispheres 13.2
2560 Male, age 74, both hemispheres 12.6
2321 Female, age 91, both hemispheres 12.2
2335 Male, age 61, both hemispheres 10.4
Nuclei of the trapezoid body
nTPM: 15.1
2159 Male, age 61, both hemispheres 17.9
1983 Male, age 76, both hemispheres 15.7
2735 Female, age 85, both hemispheres 15.0
2166 Male, age 80, both hemispheres 13.5
2368 Female, age 91, both hemispheres 13.4
Nucleus ambiguus
nTPM: 11.7
2071 Male, age 76, both hemispheres 14.1
2096 Female, age 85, both hemispheres 9.3
Nucleus cuneatus
nTPM: 11.9
2380 Male, age 80, both hemispheres 14.1
2562 Male, age 61, both hemispheres 12.8
2376 Male, age 61, both hemispheres 12.6
2808 Female, age 85, both hemispheres 12.3
2381 Male, age 80, both hemispheres 11.9
2100 Male, age 76, both hemispheres 11.7
2805 Female, age 91, both hemispheres 11.3
2131 Male, age 76, both hemispheres 10.2
2564 Male, age 74, both hemispheres 9.9
Nucleus gracilis
nTPM: 12.4
2299 Female, age 85, both hemispheres 13.2
2627 Male, age 74, both hemispheres 12.4
2382 Male, age 80, both hemispheres 11.5
Nucleus raphe magnus
nTPM: 14.8
2172 Female, age 85, both hemispheres 17.2
2051 Male, age 76, both hemispheres 15.8
2160 Male, age 61, both hemispheres 15.8
2328 Male, age 80, both hemispheres 13.8
2459 Female, age 91, both hemispheres 13.5
2455 Male, age 74, both hemispheres 12.7
Nucleus raphe obscurus
nTPM: 14.1
2800 Male, age 61, midline 14.3
2845 Female, age 85, midline 14.2
2142 Male, age 76, midline 13.9
Nucleus raphe pallidus
nTPM: 13.5
2145 Male, age 76, midline 16.3
1924 Male, age 61, midline 12.6
2183 Male, age 80, midline 11.7
Nucleus tractus solitarii
nTPM: 15.0
2144 Female, age 91, right hemisphere 18.3
2191 Female, age 85, both hemispheres 14.8
2307 Male, age 80, both hemispheres 13.6
2656 Male, age 76, both hemispheres 13.3
Paramedian reticular nucleus
nTPM: 11.9
2050 Female, age 85, both hemispheres 13.3
2313 Male, age 61, both hemispheres 12.2
2052 Male, age 76, both hemispheres 11.5
2057 Male, age 80, both hemispheres 10.8
Parvicellular reticular nuclei
nTPM: 13.2
2095 Male, age 76, both hemispheres 14.6
2558 Male, age 74, both hemispheres 12.8
2119 Male, age 80, both hemispheres 12.3
Parvicellular reticular nuclei, medullary
nTPM: 11.7
2181 Male, age 80, left hemisphere 13.1
2189 Female, age 91, both hemispheres 11.5
2091 Female, age 85, both hemispheres 10.5
Pedunculopontine tegmental nucleus
nTPM: 13.4
2338 Male, age 61, both hemispheres 13.9
1921 Female, age 85, both hemispheres 13.7
2334 Male, age 80, both hemispheres 12.7
Peritrigeminal nucleus
nTPM: 12.5
2179 Male, age 61, both hemispheres 13.8
2136 Male, age 76, both hemispheres 12.0
2067 Female, age 85, both hemispheres 11.6
Pontine nuclei
nTPM: 15.1
1968 Male, age 76, left hemisphere 17.4
2727 Male, age 61, right hemisphere 17.0
1863 Male, age 55, unknown 15.8
2454 Male, age 74, left hemisphere 15.7
2787 Female, age 85, both hemispheres 15.7
2109 Female, age 72, unknown 14.3
2319 Female, age 91, both hemispheres 12.9
2115 Male, age 80, left hemisphere 12.0
Pontine raphe nucleus
nTPM: 13.2
2122 Female, age 85, midline 15.9
2853 Male, age 76, midline 10.4
Posteroventral cochlear nucleus
nTPM: 13.0
2371 Male, age 61, both hemispheres 14.0
2070 Male, age 76, both hemispheres 13.1
2135 Female, age 91, both hemispheres 12.9
2752 Female, age 85, both hemispheres 12.5
2341 Male, age 80, both hemispheres 12.4
Prepositus hypoglossal nucleus
nTPM: 14.5
2855 Female, age 85, right hemisphere 15.2
2086 Male, age 80, both hemispheres 13.7
Principal sensory trigeminal nucleus
nTPM: 14.0
2367 Female, age 91, left hemisphere 15.0
2158 Male, age 61, both hemispheres 14.3
2008 Male, age 80, left hemisphere 14.0
2324 Male, age 76, both hemispheres 12.7
Reticular pontine nucleus, caudal
nTPM: 14.4
2092 Male, age 76, both hemispheres 15.2
2457 Female, age 91, both hemispheres 14.9
2559 Male, age 74, both hemispheres 14.2
2332 Male, age 80, right hemisphere 13.3
Reticular pontine nucleus, oral
nTPM: 13.3
2012 Female, age 85, both hemispheres 15.9
2366 Female, age 91, both hemispheres 14.1
2167 Male, age 76, both hemispheres 13.3
1939 Male, age 80, both hemispheres 12.0
2361 Male, age 74, both hemispheres 11.4
Reticulotegmental nucleus
nTPM: 12.8
2325 Male, age 76, both hemispheres 13.9
2322 Female, age 91, both hemispheres 13.6
2452 Male, age 74, both hemispheres 11.9
2333 Male, age 80, both hemispheres 11.8
Spinal trigeminal nucleus, caudal
nTPM: 12.4
2312 Male, age 61, both hemispheres 14.1
2390 Female, age 91, both hemispheres 12.5
2642 Male, age 74, both hemispheres 12.5
2447 Male, age 76, both hemispheres 12.3
2308 Male, age 80, both hemispheres 10.7
Spinal trigeminal nucleus, interpolar
nTPM: 12.4
2389 Female, age 91, both hemispheres 14.6
2066 Male, age 76, right hemisphere 13.8
2033 Male, age 80, both hemispheres 11.7
2386 Female, age 85, both hemispheres 11.4
2625 Male, age 61, both hemispheres 10.6
Spinal trigeminal nucleus, oral
nTPM: 12.0
1978 Male, age 76, both hemispheres 12.3
2164 Male, age 80, both hemispheres 12.0
2737 Female, age 85, both hemispheres 11.6
Spinal vestibular nucleus
nTPM: 12.7
2748 Male, age 76, both hemispheres 13.8
2806 Female, age 85, both hemispheres 13.8
2384 Male, age 74, both hemispheres 13.4
2186 Female, age 91, both hemispheres 13.2
2796 Male, age 61, both hemispheres 11.8
2780 Male, age 80, both hemispheres 10.4
Subcoeruleus area
nTPM: 13.5
1958 Male, age 80, both hemispheres 15.6
2089 Male, age 76, left hemisphere 15.0
2369 Female, age 85, left hemisphere 12.5
2323 Female, age 91, left hemisphere 12.3
2451 Male, age 74, both hemispheres 12.2
Superior olive
nTPM: 14.1
1875 Female, age 85, both hemispheres 16.8
2020 Male, age 76, both hemispheres 15.3
2329 Male, age 80, right hemisphere 13.8
2364 Male, age 74, right hemisphere 12.4
2561 Female, age 91, both hemispheres 12.3
Superior vestibular nucleus
nTPM: 14.0
2383 Male, age 74, both hemispheres 16.7
2015 Male, age 80, both hemispheres 13.5
2061 Male, age 76, both hemispheres 11.8
Ventral medullary reticular nucleus
nTPM: 13.3
2372 Male, age 61, both hemispheres 14.2
2060 Male, age 76, both hemispheres 12.4
Ventral periolivary nuclei
nTPM: 15.5
2130 Female, age 85, both hemispheres 17.1
2165 Male, age 80, both hemispheres 16.8
2023 Male, age 76, both hemispheres 15.0
2794 Female, age 91, left hemisphere 13.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 13.1
1986 Male, age 76, both hemispheres 13.5
2302 Female, age 91, both hemispheres 13.4
2118 Male, age 80, both hemispheres 12.9
2180 Male, age 61, both hemispheres 12.9
2741 Female, age 85, both hemispheres 12.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 13.7
1959 Male, age 76, both hemispheres 15.9
2161 Male, age 80, both hemispheres 15.2
2449 Male, age 74, both hemispheres 13.6
2840 Female, age 85, both hemispheres 13.2
2456 Female, age 91, both hemispheres 12.6
2359 Male, age 61, both hemispheres 11.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 23.3
FF:10165-103B3 76 years, female 30.2
FF:10182-103D2 60 years, female 16.4
Medulla oblongata
Scaled Tags Per Million: 30.4
FF:10174-103C3 60 years, female 32.3
FF:10038-101F2 18-64 years, mixed 29.8
FF:10155-103A2 76 years, female 29.2
Pons
Scaled Tags Per Million: 35.7
FF:10033-101E6 18-54 years, mixed 35.7

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
8.89.49.79.410.5012345678910
 		Medulla oblongata
nTPM: 9.1
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.0
Sample A Female 10.5
Sample B Female 9.4
Sample C Male 7.0
Sample D Male 9.4
7.48.59.36.29.80123456789
 		Pons
nTPM: 8.3
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 9.8
Sample C Male 7.8
Sample D Male 9.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 6.6
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.3
Sample A Male 5.3
Sample B Male 6.1
Sample C Female 7.7
Sample D Female 7.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
69352762 Antisense, RP_050412_01_B03, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.1
69352762 Antisense, RP_050412_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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