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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.9
nTPM
Monaco:
220.7
nTPM
Schmiedel:
228.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.9
HPA sample
nTPM
gdT-cell nTPM: 80.4
Samples: 6
Max nTPM: 134.7
Min nTPM: 53.1
P10809_1007
134.7
P10809_1022
67.5
P10809_1041
90.3
P10809_1060
53.1
P10809_1077
62.7
P10809_1098
74.3
MAIT T-cell nTPM: 73.9
Samples: 6
Max nTPM: 90.2
Min nTPM: 55.1
P10809_1006
82.3
P10809_1024
66.8
P10809_1043
78.5
P10809_1062
55.1
P10809_1083
70.4
P10809_1097
90.2
Memory CD4 T-cell nTPM: 62.3
Samples: 6
Max nTPM: 99.6
Min nTPM: 48.9
P10809_1014
99.6
P10809_1026
55.2
P10809_1045
57.1
P10809_1064
53.2
P10809_1086
48.9
P10809_1113
59.7
Memory CD8 T-cell nTPM: 69.3
Samples: 5
Max nTPM: 94.0
Min nTPM: 61.8
P10809_1012
94.0
P10809_1027
62.3
P10809_1046
61.8
P10809_1065
62.7
P10809_1111
65.8
Naive CD4 T-cell nTPM: 63.0
Samples: 6
Max nTPM: 93.0
Min nTPM: 44.3
P10809_1015
93.0
P10809_1030
58.0
P10809_1049
78.6
P10809_1068
44.3
P10809_1085
54.0
P10809_1112
50.1
Naive CD8 T-cell nTPM: 71.5
Samples: 6
Max nTPM: 89.1
Min nTPM: 61.2
P10809_1016
89.1
P10809_1031
74.9
P10809_1050
77.0
P10809_1069
61.2
P10809_1087
63.8
P10809_1110
62.7
T-reg nTPM: 82.0
Samples: 6
Max nTPM: 122.8
Min nTPM: 61.3
P10809_1018
83.1
P10809_1037
61.3
P10809_1056
122.8
P10809_1075
68.2
P10809_1094
84.9
P10809_1106
71.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
220.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 158.3
Samples: 4
Max nTPM: 328.5
Min nTPM: 88.4
RHH5202_R3573
91.5
RHH5230_R3602
328.5
RHH5259_R3631
124.6
RHH5288_R3660
88.4
Effector memory CD8 T-cell nTPM: 175.1
Samples: 4
Max nTPM: 365.8
Min nTPM: 80.4
RHH5203_R3574
141.0
RHH5231_R3603
113.2
RHH5260_R3632
365.8
RHH5289_R3661
80.4
MAIT T-cell nTPM: 127.0
Samples: 4
Max nTPM: 184.9
Min nTPM: 79.1
RHH5233_R3605
110.7
RHH5205_R3576
79.1
RHH5262_R3634
184.9
RHH5297_R3663
133.4
Memory CD4 T-cell TFH nTPM: 150.9
Samples: 4
Max nTPM: 229.7
Min nTPM: 85.0
RHH5300_R3666
185.5
RHH5236_R3608
229.7
RHH5265_R3637
85.0
RHH5208_R3579
103.5
Memory CD4 T-cell Th1 nTPM: 152.1
Samples: 4
Max nTPM: 275.4
Min nTPM: 77.8
RHH5210_R3581
77.8
RHH5302_R3668
120.5
RHH5238_R3610
134.5
RHH5267_R3639
275.4
Memory CD4 T-cell Th1/Th17 nTPM: 166.1
Samples: 4
Max nTPM: 419.5
Min nTPM: 46.2
RHH5303_R3669
96.8
RHH5211_R3582
101.7
RHH5239_R3611
46.2
RHH5268_R3640
419.5
Memory CD4 T-cell Th17 nTPM: 220.7
Samples: 4
Max nTPM: 387.7
Min nTPM: 37.3
RHH5304_R3670
77.7
RHH5212_R3583
380.2
RHH5240_R3612
37.3
RHH5269_R3641
387.7
Memory CD4 T-cell Th2 nTPM: 152.7
Samples: 4
Max nTPM: 310.6
Min nTPM: 77.9
RHH5305_R3671
77.9
RHH5213_R3584
129.3
RHH5241_R3613
93.0
RHH5270_R3642
310.6
Naive CD4 T-cell nTPM: 143.1
Samples: 4
Max nTPM: 268.6
Min nTPM: 86.7
RHH5306_R3672
120.4
RHH5214_R3585
268.6
RHH5242_R3614
86.7
RHH5271_R3643
96.8
Naive CD8 T-cell nTPM: 140.5
Samples: 4
Max nTPM: 214.9
Min nTPM: 93.0
RHH5201_R3572
115.5
RHH5229_R3601
214.9
RHH5258_R3630
138.6
RHH5287_R3659
93.0
Non-Vd2 gdTCR nTPM: 160.6
Samples: 4
Max nTPM: 204.4
Min nTPM: 104.7
RHH5235_R3607
196.2
RHH5264_R3636
137.2
RHH5207_R3578
104.7
RHH5299_R3665
204.4
T-reg nTPM: 126.6
Samples: 4
Max nTPM: 149.1
Min nTPM: 88.9
RHH5301_R3667
139.0
RHH5237_R3609
149.1
RHH5266_R3638
129.3
RHH5209_R3580
88.9
Terminal effector memory CD4 T-cell nTPM: 108.0
Samples: 2
Max nTPM: 116.9
Min nTPM: 99.0
RHH5243_R3615
99.0
RHH5272_R3644
116.9
Terminal effector memory CD8 T-cell nTPM: 172.9
Samples: 4
Max nTPM: 341.6
Min nTPM: 101.7
RHH5232_R3604
101.7
RHH5204_R3575
130.5
RHH5261_R3633
341.6
RHH5296_R3662
117.8
Vd2 gdTCR nTPM: 122.7
Samples: 4
Max nTPM: 165.2
Min nTPM: 82.6
RHH5234_R3606
102.7
RHH5206_R3577
165.2
RHH5263_R3635
82.6
RHH5298_R3664
140.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
