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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
232.9
nTPM
Monaco:
76.6
nTPM
Schmiedel:
4.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
232.9
HPA sample
nTPM
gdT-cell nTPM: 232.9
Samples: 6
Max nTPM: 283.0
Min nTPM: 135.4
P10809_1007
135.4
P10809_1022
275.8
P10809_1041
283.0
P10809_1060
190.9
P10809_1077
238.1
P10809_1098
274.0
MAIT T-cell nTPM: 99.5
Samples: 6
Max nTPM: 132.7
Min nTPM: 49.6
P10809_1006
49.6
P10809_1024
74.0
P10809_1043
132.7
P10809_1062
101.5
P10809_1083
118.5
P10809_1097
120.9
Memory CD4 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 58.8
Min nTPM: 9.0
P10809_1014
9.0
P10809_1026
19.8
P10809_1045
28.0
P10809_1064
58.2
P10809_1086
58.8
P10809_1113
18.7
Memory CD8 T-cell nTPM: 143.8
Samples: 5
Max nTPM: 201.1
Min nTPM: 69.1
P10809_1012
69.1
P10809_1027
135.6
P10809_1046
154.5
P10809_1065
201.1
P10809_1111
158.7
Naive CD4 T-cell nTPM: 6.9
Samples: 6
Max nTPM: 31.1
Min nTPM: 0.0
P10809_1015
0.6
P10809_1030
0.0
P10809_1049
1.5
P10809_1068
7.5
P10809_1085
31.1
P10809_1112
0.9
Naive CD8 T-cell nTPM: 120.8
Samples: 6
Max nTPM: 305.5
Min nTPM: 18.8
P10809_1016
18.8
P10809_1031
56.8
P10809_1050
92.4
P10809_1069
191.0
P10809_1087
305.5
P10809_1110
60.0
T-reg nTPM: 11.5
Samples: 6
Max nTPM: 28.3
Min nTPM: 4.1
P10809_1018
4.1
P10809_1037
4.8
P10809_1056
28.3
P10809_1075
6.4
P10809_1094
18.0
P10809_1106
7.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 16.7
Min nTPM: 8.6
RHH5202_R3573
12.8
RHH5230_R3602
12.6
RHH5259_R3631
8.6
RHH5288_R3660
16.7
Effector memory CD8 T-cell nTPM: 25.5
Samples: 4
Max nTPM: 35.9
Min nTPM: 10.7
RHH5203_R3574
35.9
RHH5231_R3603
25.9
RHH5260_R3632
29.6
RHH5289_R3661
10.7
MAIT T-cell nTPM: 16.2
Samples: 4
Max nTPM: 22.8
Min nTPM: 10.8
RHH5233_R3605
15.1
RHH5205_R3576
10.8
RHH5262_R3634
15.9
RHH5297_R3663
22.8
Memory CD4 T-cell TFH nTPM: 1.8
Samples: 4
Max nTPM: 3.7
Min nTPM: 0.0
RHH5300_R3666
3.3
RHH5236_R3608
3.7
RHH5265_R3637
0.0
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 4.2
Samples: 4
Max nTPM: 8.4
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
8.4
RHH5238_R3610
4.1
RHH5267_R3639
4.3
Memory CD4 T-cell Th1/Th17 nTPM: 5.9
Samples: 4
Max nTPM: 10.3
Min nTPM: 2.0
RHH5303_R3669
10.3
RHH5211_R3582
6.6
RHH5239_R3611
4.8
RHH5268_R3640
2.0
Memory CD4 T-cell Th17 nTPM: 4.3
Samples: 4
Max nTPM: 9.7
Min nTPM: 1.9
RHH5304_R3670
9.7
RHH5212_R3583
3.0
RHH5240_R3612
1.9
RHH5269_R3641
2.5
Memory CD4 T-cell Th2 nTPM: 1.9
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.0
RHH5305_R3671
4.7
RHH5213_R3584
1.4
RHH5241_R3613
1.4
RHH5270_R3642
0.0
Naive CD4 T-cell nTPM: 0.4
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
1.6
RHH5242_R3614
0.0
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 4.2
Samples: 4
Max nTPM: 10.5
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
10.5
RHH5258_R3630
3.6
RHH5287_R3659
2.6
Non-Vd2 gdTCR nTPM: 62.0
Samples: 4
Max nTPM: 91.3
Min nTPM: 46.7
RHH5235_R3607
48.0
RHH5264_R3636
46.7
RHH5207_R3578
62.0
RHH5299_R3665
91.3
T-reg nTPM: 2.9
Samples: 4
Max nTPM: 6.1
Min nTPM: 0.0
RHH5301_R3667
0.0
RHH5237_R3609
6.1
RHH5266_R3638
1.6
RHH5209_R3580
3.9
Terminal effector memory CD4 T-cell nTPM: 18.9
Samples: 2
Max nTPM: 20.1
Min nTPM: 17.7
RHH5243_R3615
17.7
RHH5272_R3644
20.1
Terminal effector memory CD8 T-cell nTPM: 76.6
Samples: 4
Max nTPM: 139.6
Min nTPM: 35.8
RHH5232_R3604
35.8
RHH5204_R3575
139.6
RHH5261_R3633
60.2
RHH5296_R3662
70.7
Vd2 gdTCR nTPM: 55.6
Samples: 4
Max nTPM: 102.6
Min nTPM: 37.0
RHH5234_R3606
37.0
RHH5206_R3577
102.6
RHH5263_R3635
37.4
RHH5298_R3664
45.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
