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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
10.1
nTPM
Monaco:
21.7
nTPM
Schmiedel:
9.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10.1
HPA sample
nTPM
gdT-cell nTPM: 6.9
Samples: 6
Max nTPM: 11.8
Min nTPM: 4.0
P10809_1007
8.3
P10809_1022
5.5
P10809_1041
11.8
P10809_1060
4.0
P10809_1077
6.7
P10809_1098
5.0
MAIT T-cell nTPM: 3.9
Samples: 6
Max nTPM: 6.6
Min nTPM: 0.9
P10809_1006
3.2
P10809_1024
0.9
P10809_1043
5.3
P10809_1062
2.5
P10809_1083
6.6
P10809_1097
4.8
Memory CD4 T-cell nTPM: 10.2
Samples: 6
Max nTPM: 15.6
Min nTPM: 4.2
P10809_1014
9.1
P10809_1026
15.3
P10809_1045
15.6
P10809_1064
12.2
P10809_1086
4.5
P10809_1113
4.2
Memory CD8 T-cell nTPM: 9.0
Samples: 5
Max nTPM: 12.3
Min nTPM: 6.7
P10809_1012
8.1
P10809_1027
6.7
P10809_1046
12.3
P10809_1065
8.0
P10809_1111
10.1
Naive CD4 T-cell nTPM: 7.9
Samples: 6
Max nTPM: 23.0
Min nTPM: 1.2
P10809_1015
4.6
P10809_1030
5.0
P10809_1049
23.0
P10809_1068
1.2
P10809_1085
6.4
P10809_1112
6.9
Naive CD8 T-cell nTPM: 6.3
Samples: 6
Max nTPM: 11.3
Min nTPM: 2.0
P10809_1016
3.9
P10809_1031
10.4
P10809_1050
6.4
P10809_1069
11.3
P10809_1087
2.0
P10809_1110
3.6
T-reg nTPM: 5.4
Samples: 6
Max nTPM: 14.6
Min nTPM: 1.0
P10809_1018
5.4
P10809_1037
5.3
P10809_1056
14.6
P10809_1075
3.2
P10809_1094
1.0
P10809_1106
2.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.5
Samples: 4
Max nTPM: 26.5
Min nTPM: 6.6
RHH5202_R3573
8.7
RHH5230_R3602
26.5
RHH5259_R3631
6.6
RHH5288_R3660
12.3
Effector memory CD8 T-cell nTPM: 15.9
Samples: 4
Max nTPM: 29.1
Min nTPM: 3.9
RHH5203_R3574
9.8
RHH5231_R3603
20.9
RHH5260_R3632
29.1
RHH5289_R3661
3.9
MAIT T-cell nTPM: 12.0
Samples: 4
Max nTPM: 23.1
Min nTPM: 6.7
RHH5233_R3605
6.7
RHH5205_R3576
9.9
RHH5262_R3634
23.1
RHH5297_R3663
8.4
Memory CD4 T-cell TFH nTPM: 18.0
Samples: 4
Max nTPM: 34.1
Min nTPM: 7.2
RHH5300_R3666
13.3
RHH5236_R3608
34.1
RHH5265_R3637
17.4
RHH5208_R3579
7.2
Memory CD4 T-cell Th1 nTPM: 14.1
Samples: 4
Max nTPM: 21.0
Min nTPM: 7.3
RHH5210_R3581
7.3
RHH5302_R3668
11.9
RHH5238_R3610
16.0
RHH5267_R3639
21.0
Memory CD4 T-cell Th1/Th17 nTPM: 15.9
Samples: 4
Max nTPM: 28.2
Min nTPM: 4.3
RHH5303_R3669
10.8
RHH5211_R3582
20.4
RHH5239_R3611
4.3
RHH5268_R3640
28.2
Memory CD4 T-cell Th17 nTPM: 15.7
Samples: 4
Max nTPM: 28.6
Min nTPM: 7.5
RHH5304_R3670
10.1
RHH5212_R3583
28.6
RHH5240_R3612
7.5
RHH5269_R3641
16.7
Memory CD4 T-cell Th2 nTPM: 15.6
Samples: 4
Max nTPM: 26.6
Min nTPM: 9.3
RHH5305_R3671
9.9
RHH5213_R3584
16.7
RHH5241_R3613
9.3
RHH5270_R3642
26.6
Naive CD4 T-cell nTPM: 18.6
Samples: 4
Max nTPM: 29.8
Min nTPM: 9.0
RHH5306_R3672
16.7
RHH5214_R3585
29.8
RHH5242_R3614
9.0
RHH5271_R3643
18.9
Naive CD8 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 12.8
Min nTPM: 4.6
RHH5201_R3572
4.6
RHH5229_R3601
7.2
RHH5258_R3630
6.5
RHH5287_R3659
12.8
Non-Vd2 gdTCR nTPM: 18.3
Samples: 4
Max nTPM: 33.1
Min nTPM: 8.0
RHH5235_R3607
33.1
RHH5264_R3636
17.7
RHH5207_R3578
8.0
RHH5299_R3665
14.3
T-reg nTPM: 21.7
Samples: 4
Max nTPM: 28.0
Min nTPM: 16.7
RHH5301_R3667
16.7
RHH5237_R3609
28.0
RHH5266_R3638
17.5
RHH5209_R3580
24.6
Terminal effector memory CD4 T-cell nTPM: 18.5
Samples: 2
Max nTPM: 24.8
Min nTPM: 12.2
RHH5243_R3615
24.8
RHH5272_R3644
12.2
Terminal effector memory CD8 T-cell nTPM: 14.7
Samples: 4
Max nTPM: 18.7
Min nTPM: 11.7
RHH5232_R3604
15.4
RHH5204_R3575
11.7
RHH5261_R3633
18.7
RHH5296_R3662
13.0
Vd2 gdTCR nTPM: 9.5
Samples: 4
Max nTPM: 14.2
Min nTPM: 6.3
RHH5234_R3606
9.6
RHH5206_R3577
6.3
RHH5263_R3635
14.2
RHH5298_R3664
8.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
