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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
706.3
nTPM
Monaco:
1404.3
nTPM
Schmiedel:
1395.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
706.3
HPA sample
nTPM
gdT-cell nTPM: 553.2
Samples: 6
Max nTPM: 687.6
Min nTPM: 445.0
P10809_1007
445.0
P10809_1022
638.1
P10809_1041
687.6
P10809_1060
520.2
P10809_1077
506.0
P10809_1098
522.0
MAIT T-cell nTPM: 700.3
Samples: 6
Max nTPM: 894.7
Min nTPM: 560.1
P10809_1006
627.6
P10809_1024
894.7
P10809_1043
685.6
P10809_1062
707.1
P10809_1083
560.1
P10809_1097
726.6
Memory CD4 T-cell nTPM: 660.7
Samples: 6
Max nTPM: 751.0
Min nTPM: 597.8
P10809_1014
597.8
P10809_1026
684.5
P10809_1045
751.0
P10809_1064
621.5
P10809_1086
634.7
P10809_1113
674.8
Memory CD8 T-cell nTPM: 595.3
Samples: 5
Max nTPM: 605.6
Min nTPM: 581.0
P10809_1012
603.8
P10809_1027
581.0
P10809_1046
605.6
P10809_1065
592.8
P10809_1111
593.2
Naive CD4 T-cell nTPM: 702.5
Samples: 6
Max nTPM: 838.2
Min nTPM: 620.8
P10809_1015
645.7
P10809_1030
720.6
P10809_1049
838.2
P10809_1068
727.9
P10809_1085
620.8
P10809_1112
661.8
Naive CD8 T-cell nTPM: 612.5
Samples: 6
Max nTPM: 703.6
Min nTPM: 554.1
P10809_1016
571.6
P10809_1031
703.6
P10809_1050
571.0
P10809_1069
698.1
P10809_1087
554.1
P10809_1110
576.3
T-reg nTPM: 706.3
Samples: 6
Max nTPM: 836.6
Min nTPM: 570.7
P10809_1018
570.7
P10809_1037
656.8
P10809_1056
836.6
P10809_1075
608.7
P10809_1094
761.0
P10809_1106
803.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1404.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1069.6
Samples: 4
Max nTPM: 1314.4
Min nTPM: 785.9
RHH5202_R3573
1314.4
RHH5230_R3602
1038.9
RHH5259_R3631
785.9
RHH5288_R3660
1139.1
Effector memory CD8 T-cell nTPM: 1216.0
Samples: 4
Max nTPM: 1347.1
Min nTPM: 1020.4
RHH5203_R3574
1282.5
RHH5231_R3603
1213.9
RHH5260_R3632
1020.4
RHH5289_R3661
1347.1
MAIT T-cell nTPM: 1311.9
Samples: 4
Max nTPM: 1381.3
Min nTPM: 1270.0
RHH5233_R3605
1300.6
RHH5205_R3576
1295.8
RHH5262_R3634
1381.3
RHH5297_R3663
1270.0
Memory CD4 T-cell TFH nTPM: 1308.3
Samples: 4
Max nTPM: 1501.5
Min nTPM: 1126.5
RHH5300_R3666
1126.5
RHH5236_R3608
1501.5
RHH5265_R3637
1242.9
RHH5208_R3579
1362.4
Memory CD4 T-cell Th1 nTPM: 1085.8
Samples: 4
Max nTPM: 1289.5
Min nTPM: 770.4
RHH5210_R3581
1289.5
RHH5302_R3668
1171.1
RHH5238_R3610
770.4
RHH5267_R3639
1112.3
Memory CD4 T-cell Th1/Th17 nTPM: 1236.0
Samples: 4
Max nTPM: 1529.5
Min nTPM: 738.0
RHH5303_R3669
1529.5
RHH5211_R3582
1509.4
RHH5239_R3611
738.0
RHH5268_R3640
1167.1
Memory CD4 T-cell Th17 nTPM: 1263.4
Samples: 4
Max nTPM: 1408.8
Min nTPM: 1053.3
RHH5304_R3670
1408.8
RHH5212_R3583
1392.5
RHH5240_R3612
1199.1
RHH5269_R3641
1053.3
Memory CD4 T-cell Th2 nTPM: 1404.3
Samples: 4
Max nTPM: 1618.0
Min nTPM: 1328.5
RHH5305_R3671
1337.3
RHH5213_R3584
1618.0
RHH5241_R3613
1328.5
RHH5270_R3642
1333.5
Naive CD4 T-cell nTPM: 1356.1
Samples: 4
Max nTPM: 1551.3
Min nTPM: 1211.0
RHH5306_R3672
1300.4
RHH5214_R3585
1551.3
RHH5242_R3614
1211.0
RHH5271_R3643
1361.6
Naive CD8 T-cell nTPM: 1091.6
Samples: 4
Max nTPM: 1471.2
Min nTPM: 659.7
RHH5201_R3572
1471.2
RHH5229_R3601
659.7
RHH5258_R3630
1125.2
RHH5287_R3659
1110.1
Non-Vd2 gdTCR nTPM: 1131.6
Samples: 4
Max nTPM: 1413.4
Min nTPM: 889.5
RHH5235_R3607
899.4
RHH5264_R3636
1324.0
RHH5207_R3578
1413.4
RHH5299_R3665
889.5
T-reg nTPM: 1297.4
Samples: 4
Max nTPM: 1581.8
Min nTPM: 1133.0
RHH5301_R3667
1180.5
RHH5237_R3609
1581.8
RHH5266_R3638
1133.0
RHH5209_R3580
1294.2
Terminal effector memory CD4 T-cell nTPM: 1237.4
Samples: 2
Max nTPM: 1329.2
Min nTPM: 1145.6
RHH5243_R3615
1145.6
RHH5272_R3644
1329.2
Terminal effector memory CD8 T-cell nTPM: 1132.9
Samples: 4
Max nTPM: 1218.3
Min nTPM: 1069.4
RHH5232_R3604
1218.3
RHH5204_R3575
1128.9
RHH5261_R3633
1069.4
RHH5296_R3662
1114.9
Vd2 gdTCR nTPM: 1264.1
Samples: 4
Max nTPM: 1407.8
Min nTPM: 1064.9
RHH5234_R3606
1345.5
RHH5206_R3577
1407.8
RHH5263_R3635
1238.2
RHH5298_R3664
1064.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.