HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:76.8 nTPM
HPA Brain:77.0 nTPM
GTEx:76.8 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:67.1 nTPM
Mouse:149.7 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.0
Sample id Sample description nTPM
Hippocampus
nTPM: 73.5
1898 Male, age 80, left hemisphere 86.9
1855 Male, age 76, left hemisphere 77.0
2529 Female, age 94, left hemisphere 74.6
2621 Female, age 67, right hemisphere 72.9
2148 Female, age 91, left hemisphere 65.1
1911 Female, age 85, right hemisphere 64.6
Dentate gyrus
nTPM: 71.9
2530 Female, age 94, left hemisphere 80.4
2010 Male, age 76, both hemispheres 78.4
1927 Female, age 91, both hemispheres 73.9
2528 Male, age 74, both hemispheres 72.0
2246 Female, age 85, both hemispheres 66.6
2531 Female, age 67, both hemispheres 60.1
Entorhinal gyrus
nTPM: 72.5
2764 Male, age 80, right hemisphere 82.6
2613 Female, age 94, left hemisphere 79.3
2117 Female, age 91, right hemisphere 73.6
1787 Male, age 76, left hemisphere 71.3
1938 Female, age 85, left hemisphere 71.0
2686 Male, age 75, right hemisphere 57.0
Hippocampus, CA1
nTPM: 77.0
2749 Male, age 80, left hemisphere 101.6
1873 Female, age 85, both hemispheres 74.0
2527 Male, age 74, both hemispheres 73.8
2082 Female, age 91, right hemisphere 69.9
2045 Male, age 76, both hemispheres 65.5
Hippocampus, CA2
nTPM: 75.3
1963 Male, age 80, left hemisphere 84.3
1892 Male, age 76, both hemispheres 83.2
2437 Female, age 94, left hemisphere 83.1
2249 Male, age 74, both hemispheres 74.2
2113 Female, age 91, right hemisphere 64.3
1940 Female, age 85, left hemisphere 62.5
Hippocampus, CA3
nTPM: 70.5
2436 Male, age 74, both hemispheres 76.7
2620 Female, age 94, left hemisphere 75.2
2137 Male, age 80, left hemisphere 75.0
1867 Male, age 76, both hemispheres 72.2
1891 Female, age 85, both hemispheres 64.6
2861 Female, age 67, both hemispheres 59.5
Parahippocampal cortex
nTPM: 65.0
1850 Male, age 80, both hemispheres 72.1
2692 Male, age 74, both hemispheres 69.0
2245 Female, age 91, both hemispheres 68.7
1990 Female, age 91, right hemisphere 66.8
2018 Male, age 76, both hemispheres 66.7
2250 Female, age 67, right hemisphere 66.7
1933 Female, age 85, both hemispheres 64.2
2622 Female, age 67, right hemisphere 61.8
2532 Female, age 72, left hemisphere 60.3
2693 Female, age 94, both hemispheres 53.5
Perirhinal gyrus
nTPM: 70.5
1847 Female, age 91, left hemisphere 76.3
1794 Male, age 80, right hemisphere 75.6
1841 Female, age 85, right hemisphere 71.1
2521 Female, age 94, right hemisphere 68.5
2848 Male, age 76, right hemisphere 61.0
Subiculum
nTPM: 71.3
2438 Female, age 94, left hemisphere 79.4
2619 Male, age 74, both hemispheres 75.5
1977 Female, age 85, both hemispheres 72.5
1901 Male, age 80, both hemispheres 68.6
2042 Male, age 76, both hemispheres 66.8
2729 Female, age 91, right hemisphere 64.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.8
Samples: 197

Max nTPM: 144.3
Min nTPM: 28.6
Std nTPM: 18.4
Median nTPM: 73.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 127.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 126.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 121.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 118.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 116.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 113.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 111.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 110.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 107.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 106.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.6
FF:10153-102I9 76 years, female 45.8
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.1
Pig sample Sample description nTPM
Subiculum
nTPM: 57.8
Samples: 4

Max nTPM: 74.8
Min nTPM: 49.3
Sample A Female 74.8
Sample B Female 50.5
Sample C Male 56.7
Sample D Male 49.3
Dorsal hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 88.0
Min nTPM: 49.7
Sample A Female 88.0
Sample B Female 64.3
Sample C Male 62.9
Sample D Male 49.7
Entorhinal cortex
nTPM: 56.8
Samples: 4

Max nTPM: 60.5
Min nTPM: 49.0
Sample A Female 60.5
Sample B Female 57.6
Sample C Male 60.0
Sample D Male 49.0
Ventral hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 81.8
Min nTPM: 45.9
Sample A Female 71.3
Sample B Female 45.9
Sample C Male 81.8
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.5
Samples: 4

Max nTPM: 143.5
Min nTPM: 130.0
Sample A Male 130.7
Sample B Male 130.0
Sample C Female 143.5
Sample D Female 133.8
Hippocampal formation
nTPM: 149.7
Samples: 4

Max nTPM: 156.3
Min nTPM: 143.1
Sample A Male 156.3
Sample B Male 143.1
Sample C Female 151.5
Sample D Female 148.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
67978711 Antisense, RP_040923_01_F07, Mouse strain C57BL/6J (56 days, male) 9.2

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