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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.9
nTPM
Monaco:
135.2
nTPM
Schmiedel:
55.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.9
HPA sample
nTPM
gdT-cell nTPM: 78.1
Samples: 6
Max nTPM: 102.1
Min nTPM: 56.8
P10809_1007
56.8
P10809_1022
102.1
P10809_1041
89.1
P10809_1060
68.8
P10809_1077
65.1
P10809_1098
86.5
MAIT T-cell nTPM: 81.9
Samples: 6
Max nTPM: 100.8
Min nTPM: 56.7
P10809_1006
56.7
P10809_1024
100.8
P10809_1043
93.9
P10809_1062
85.4
P10809_1083
61.9
P10809_1097
92.8
Memory CD4 T-cell nTPM: 81.1
Samples: 6
Max nTPM: 99.9
Min nTPM: 61.3
P10809_1014
64.2
P10809_1026
86.9
P10809_1045
99.9
P10809_1064
81.8
P10809_1086
61.3
P10809_1113
92.5
Memory CD8 T-cell nTPM: 78.3
Samples: 5
Max nTPM: 103.0
Min nTPM: 53.5
P10809_1012
53.5
P10809_1027
69.4
P10809_1046
103.0
P10809_1065
76.4
P10809_1111
89.2
Naive CD4 T-cell nTPM: 56.9
Samples: 6
Max nTPM: 75.9
Min nTPM: 36.4
P10809_1015
36.4
P10809_1030
49.6
P10809_1049
75.9
P10809_1068
48.3
P10809_1085
61.0
P10809_1112
70.0
Naive CD8 T-cell nTPM: 71.9
Samples: 6
Max nTPM: 98.8
Min nTPM: 43.9
P10809_1016
43.9
P10809_1031
98.8
P10809_1050
70.0
P10809_1069
81.7
P10809_1087
68.2
P10809_1110
69.0
T-reg nTPM: 115.9
Samples: 6
Max nTPM: 187.0
Min nTPM: 98.7
P10809_1018
101.9
P10809_1037
102.0
P10809_1056
187.0
P10809_1075
98.7
P10809_1094
106.9
P10809_1106
98.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.3
Samples: 4
Max nTPM: 114.5
Min nTPM: 87.4
RHH5202_R3573
87.8
RHH5230_R3602
103.6
RHH5259_R3631
87.4
RHH5288_R3660
114.5
Effector memory CD8 T-cell nTPM: 131.4
Samples: 4
Max nTPM: 148.1
Min nTPM: 114.6
RHH5203_R3574
127.8
RHH5231_R3603
148.1
RHH5260_R3632
114.6
RHH5289_R3661
135.1
MAIT T-cell nTPM: 104.4
Samples: 4
Max nTPM: 111.4
Min nTPM: 99.8
RHH5233_R3605
102.0
RHH5205_R3576
99.8
RHH5262_R3634
104.5
RHH5297_R3663
111.4
Memory CD4 T-cell TFH nTPM: 98.2
Samples: 4
Max nTPM: 105.9
Min nTPM: 93.5
RHH5300_R3666
95.9
RHH5236_R3608
97.4
RHH5265_R3637
93.5
RHH5208_R3579
105.9
Memory CD4 T-cell Th1 nTPM: 84.3
Samples: 4
Max nTPM: 91.6
Min nTPM: 73.5
RHH5210_R3581
83.9
RHH5302_R3668
91.6
RHH5238_R3610
73.5
RHH5267_R3639
88.2
Memory CD4 T-cell Th1/Th17 nTPM: 92.5
Samples: 4
Max nTPM: 118.7
Min nTPM: 72.6
RHH5303_R3669
118.7
RHH5211_R3582
83.1
RHH5239_R3611
72.6
RHH5268_R3640
95.5
Memory CD4 T-cell Th17 nTPM: 106.4
Samples: 4
Max nTPM: 117.1
Min nTPM: 90.9
RHH5304_R3670
117.1
RHH5212_R3583
90.9
RHH5240_R3612
114.9
RHH5269_R3641
102.8
Memory CD4 T-cell Th2 nTPM: 113.0
Samples: 4
Max nTPM: 127.8
Min nTPM: 98.1
RHH5305_R3671
107.6
RHH5213_R3584
127.8
RHH5241_R3613
118.4
RHH5270_R3642
98.1
Naive CD4 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 91.5
Min nTPM: 63.0
RHH5306_R3672
91.5
RHH5214_R3585
63.0
RHH5242_R3614
76.1
RHH5271_R3643
78.1
Naive CD8 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 102.6
Min nTPM: 73.8
RHH5201_R3572
102.6
RHH5229_R3601
73.8
RHH5258_R3630
76.5
RHH5287_R3659
78.8
Non-Vd2 gdTCR nTPM: 135.2
Samples: 4
Max nTPM: 160.9
Min nTPM: 121.1
RHH5235_R3607
160.9
RHH5264_R3636
129.4
RHH5207_R3578
129.5
RHH5299_R3665
121.1
T-reg nTPM: 97.4
Samples: 4
Max nTPM: 133.0
Min nTPM: 79.7
RHH5301_R3667
79.7
RHH5237_R3609
133.0
RHH5266_R3638
85.9
RHH5209_R3580
90.9
Terminal effector memory CD4 T-cell nTPM: 121.6
Samples: 2
Max nTPM: 153.6
Min nTPM: 89.5
RHH5243_R3615
153.6
RHH5272_R3644
89.5
Terminal effector memory CD8 T-cell nTPM: 126.1
Samples: 4
Max nTPM: 178.5
Min nTPM: 102.6
RHH5232_R3604
178.5
RHH5204_R3575
106.4
RHH5261_R3633
102.6
RHH5296_R3662
116.8
Vd2 gdTCR nTPM: 104.9
Samples: 4
Max nTPM: 111.7
Min nTPM: 99.3
RHH5234_R3606
99.3
RHH5206_R3577
104.3
RHH5263_R3635
111.7
RHH5298_R3664
104.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
