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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
118.1
nTPM
Monaco:
63.6
nTPM
Schmiedel:
74.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.1
HPA sample
nTPM
gdT-cell nTPM: 66.7
Samples: 6
Max nTPM: 87.2
Min nTPM: 45.7
P10809_1007
45.7
P10809_1022
74.7
P10809_1041
65.7
P10809_1060
59.2
P10809_1077
87.2
P10809_1098
67.7
MAIT T-cell nTPM: 64.3
Samples: 6
Max nTPM: 110.6
Min nTPM: 30.3
P10809_1006
30.3
P10809_1024
39.9
P10809_1043
75.6
P10809_1062
57.3
P10809_1083
110.6
P10809_1097
72.1
Memory CD4 T-cell nTPM: 83.3
Samples: 6
Max nTPM: 103.2
Min nTPM: 56.1
P10809_1014
56.1
P10809_1026
103.2
P10809_1045
82.6
P10809_1064
84.2
P10809_1086
78.9
P10809_1113
94.8
Memory CD8 T-cell nTPM: 64.7
Samples: 5
Max nTPM: 83.1
Min nTPM: 44.4
P10809_1012
44.4
P10809_1027
56.6
P10809_1046
83.1
P10809_1065
58.6
P10809_1111
81.0
Naive CD4 T-cell nTPM: 118.2
Samples: 6
Max nTPM: 180.9
Min nTPM: 55.1
P10809_1015
55.1
P10809_1030
130.8
P10809_1049
180.9
P10809_1068
117.6
P10809_1085
99.0
P10809_1112
125.6
Naive CD8 T-cell nTPM: 85.7
Samples: 6
Max nTPM: 93.8
Min nTPM: 71.4
P10809_1016
71.4
P10809_1031
93.8
P10809_1050
86.9
P10809_1069
89.4
P10809_1087
81.8
P10809_1110
90.6
T-reg nTPM: 99.2
Samples: 6
Max nTPM: 156.2
Min nTPM: 68.6
P10809_1018
68.6
P10809_1037
73.0
P10809_1056
75.1
P10809_1075
117.0
P10809_1094
156.2
P10809_1106
105.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.6
Samples: 4
Max nTPM: 55.9
Min nTPM: 26.4
RHH5202_R3573
27.6
RHH5230_R3602
26.4
RHH5259_R3631
55.9
RHH5288_R3660
52.6
Effector memory CD8 T-cell nTPM: 28.1
Samples: 4
Max nTPM: 38.1
Min nTPM: 19.5
RHH5203_R3574
38.1
RHH5231_R3603
22.3
RHH5260_R3632
32.3
RHH5289_R3661
19.5
MAIT T-cell nTPM: 33.9
Samples: 4
Max nTPM: 44.1
Min nTPM: 19.8
RHH5233_R3605
40.7
RHH5205_R3576
19.8
RHH5262_R3634
31.1
RHH5297_R3663
44.1
Memory CD4 T-cell TFH nTPM: 62.4
Samples: 4
Max nTPM: 101.6
Min nTPM: 40.0
RHH5300_R3666
60.5
RHH5236_R3608
101.6
RHH5265_R3637
40.0
RHH5208_R3579
47.3
Memory CD4 T-cell Th1 nTPM: 54.0
Samples: 4
Max nTPM: 92.6
Min nTPM: 39.0
RHH5210_R3581
39.0
RHH5302_R3668
92.6
RHH5238_R3610
40.3
RHH5267_R3639
43.9
Memory CD4 T-cell Th1/Th17 nTPM: 41.6
Samples: 4
Max nTPM: 60.8
Min nTPM: 25.4
RHH5303_R3669
60.8
RHH5211_R3582
44.7
RHH5239_R3611
25.4
RHH5268_R3640
35.3
Memory CD4 T-cell Th17 nTPM: 30.5
Samples: 4
Max nTPM: 40.7
Min nTPM: 24.3
RHH5304_R3670
24.4
RHH5212_R3583
40.7
RHH5240_R3612
32.6
RHH5269_R3641
24.3
Memory CD4 T-cell Th2 nTPM: 46.6
Samples: 4
Max nTPM: 56.5
Min nTPM: 34.8
RHH5305_R3671
56.5
RHH5213_R3584
38.7
RHH5241_R3613
56.3
RHH5270_R3642
34.8
Naive CD4 T-cell nTPM: 63.6
Samples: 4
Max nTPM: 105.2
Min nTPM: 40.8
RHH5306_R3672
58.7
RHH5214_R3585
105.2
RHH5242_R3614
40.8
RHH5271_R3643
49.7
Naive CD8 T-cell nTPM: 41.0
Samples: 4
Max nTPM: 48.0
Min nTPM: 34.4
RHH5201_R3572
34.4
RHH5229_R3601
39.8
RHH5258_R3630
48.0
RHH5287_R3659
41.8
Non-Vd2 gdTCR nTPM: 44.4
Samples: 4
Max nTPM: 72.5
Min nTPM: 27.3
RHH5235_R3607
29.0
RHH5264_R3636
48.8
RHH5207_R3578
27.3
RHH5299_R3665
72.5
T-reg nTPM: 59.2
Samples: 4
Max nTPM: 83.2
Min nTPM: 36.0
RHH5301_R3667
83.2
RHH5237_R3609
64.6
RHH5266_R3638
36.0
RHH5209_R3580
52.9
Terminal effector memory CD4 T-cell nTPM: 24.7
Samples: 2
Max nTPM: 30.3
Min nTPM: 19.0
RHH5243_R3615
19.0
RHH5272_R3644
30.3
Terminal effector memory CD8 T-cell nTPM: 46.8
Samples: 4
Max nTPM: 79.8
Min nTPM: 29.0
RHH5232_R3604
29.0
RHH5204_R3575
79.8
RHH5261_R3633
33.3
RHH5296_R3662
44.9
Vd2 gdTCR nTPM: 50.3
Samples: 4
Max nTPM: 74.6
Min nTPM: 35.9
RHH5234_R3606
36.5
RHH5206_R3577
74.6
RHH5263_R3635
35.9
RHH5298_R3664
54.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
