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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.8
nTPM
Monaco:
130.7
nTPM
Schmiedel:
81.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.8
HPA sample
nTPM
gdT-cell nTPM: 36.6
Samples: 6
Max nTPM: 41.8
Min nTPM: 29.4
P10809_1007
41.8
P10809_1022
38.0
P10809_1041
41.7
P10809_1060
35.5
P10809_1077
29.4
P10809_1098
33.4
MAIT T-cell nTPM: 36.8
Samples: 6
Max nTPM: 57.9
Min nTPM: 18.9
P10809_1006
35.1
P10809_1024
57.9
P10809_1043
39.5
P10809_1062
31.0
P10809_1083
18.9
P10809_1097
38.6
Memory CD4 T-cell nTPM: 29.3
Samples: 6
Max nTPM: 39.0
Min nTPM: 23.3
P10809_1014
32.6
P10809_1026
24.4
P10809_1045
39.0
P10809_1064
23.3
P10809_1086
29.5
P10809_1113
27.2
Memory CD8 T-cell nTPM: 41.1
Samples: 5
Max nTPM: 53.6
Min nTPM: 24.3
P10809_1012
36.5
P10809_1027
53.6
P10809_1046
44.4
P10809_1065
24.3
P10809_1111
46.8
Naive CD4 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 46.0
Min nTPM: 30.4
P10809_1015
41.1
P10809_1030
46.0
P10809_1049
34.9
P10809_1068
32.1
P10809_1085
30.4
P10809_1112
37.9
Naive CD8 T-cell nTPM: 41.8
Samples: 6
Max nTPM: 76.2
Min nTPM: 26.3
P10809_1016
47.6
P10809_1031
76.2
P10809_1050
43.6
P10809_1069
29.0
P10809_1087
26.3
P10809_1110
28.0
T-reg nTPM: 22.9
Samples: 6
Max nTPM: 35.2
Min nTPM: 11.2
P10809_1018
23.2
P10809_1037
23.7
P10809_1056
35.2
P10809_1075
11.2
P10809_1094
16.8
P10809_1106
27.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.7
Samples: 4
Max nTPM: 131.7
Min nTPM: 46.7
RHH5202_R3573
131.7
RHH5230_R3602
46.7
RHH5259_R3631
52.4
RHH5288_R3660
108.1
Effector memory CD8 T-cell nTPM: 72.9
Samples: 4
Max nTPM: 83.9
Min nTPM: 53.5
RHH5203_R3574
77.7
RHH5231_R3603
83.9
RHH5260_R3632
53.5
RHH5289_R3661
76.3
MAIT T-cell nTPM: 98.5
Samples: 4
Max nTPM: 128.5
Min nTPM: 63.3
RHH5233_R3605
112.6
RHH5205_R3576
63.3
RHH5262_R3634
89.4
RHH5297_R3663
128.5
Memory CD4 T-cell TFH nTPM: 84.1
Samples: 4
Max nTPM: 110.9
Min nTPM: 67.7
RHH5300_R3666
110.9
RHH5236_R3608
68.7
RHH5265_R3637
67.7
RHH5208_R3579
89.1
Memory CD4 T-cell Th1 nTPM: 81.9
Samples: 4
Max nTPM: 117.8
Min nTPM: 36.4
RHH5210_R3581
116.9
RHH5302_R3668
117.8
RHH5238_R3610
36.4
RHH5267_R3639
56.3
Memory CD4 T-cell Th1/Th17 nTPM: 72.4
Samples: 4
Max nTPM: 121.8
Min nTPM: 34.7
RHH5303_R3669
121.8
RHH5211_R3582
70.6
RHH5239_R3611
34.7
RHH5268_R3640
62.5
Memory CD4 T-cell Th17 nTPM: 63.9
Samples: 4
Max nTPM: 96.8
Min nTPM: 36.3
RHH5304_R3670
73.2
RHH5212_R3583
96.8
RHH5240_R3612
49.1
RHH5269_R3641
36.3
Memory CD4 T-cell Th2 nTPM: 91.7
Samples: 4
Max nTPM: 134.9
Min nTPM: 69.5
RHH5305_R3671
83.3
RHH5213_R3584
79.1
RHH5241_R3613
134.9
RHH5270_R3642
69.5
Naive CD4 T-cell nTPM: 109.9
Samples: 4
Max nTPM: 136.0
Min nTPM: 80.2
RHH5306_R3672
116.5
RHH5214_R3585
136.0
RHH5242_R3614
106.7
RHH5271_R3643
80.2
Naive CD8 T-cell nTPM: 80.1
Samples: 4
Max nTPM: 110.7
Min nTPM: 45.1
RHH5201_R3572
110.7
RHH5229_R3601
45.1
RHH5258_R3630
88.9
RHH5287_R3659
75.8
Non-Vd2 gdTCR nTPM: 102.3
Samples: 4
Max nTPM: 136.9
Min nTPM: 57.1
RHH5235_R3607
57.1
RHH5264_R3636
125.3
RHH5207_R3578
89.9
RHH5299_R3665
136.9
T-reg nTPM: 69.7
Samples: 4
Max nTPM: 92.8
Min nTPM: 59.7
RHH5301_R3667
92.8
RHH5237_R3609
65.3
RHH5266_R3638
59.7
RHH5209_R3580
60.8
Terminal effector memory CD4 T-cell nTPM: 86.8
Samples: 2
Max nTPM: 110.4
Min nTPM: 63.2
RHH5243_R3615
63.2
RHH5272_R3644
110.4
Terminal effector memory CD8 T-cell nTPM: 106.6
Samples: 4
Max nTPM: 133.8
Min nTPM: 45.9
RHH5232_R3604
120.9
RHH5204_R3575
133.8
RHH5261_R3633
45.9
RHH5296_R3662
125.9
Vd2 gdTCR nTPM: 130.7
Samples: 4
Max nTPM: 190.4
Min nTPM: 78.7
RHH5234_R3606
90.0
RHH5206_R3577
163.5
RHH5263_R3635
78.7
RHH5298_R3664
190.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
