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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.8
nTPM
Monaco:
507.7
nTPM
Schmiedel:
71.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.8
HPA sample
nTPM
gdT-cell nTPM: 13.4
Samples: 6
Max nTPM: 17.0
Min nTPM: 8.8
P10809_1007
8.8
P10809_1022
13.4
P10809_1041
12.1
P10809_1060
17.0
P10809_1077
15.4
P10809_1098
13.9
MAIT T-cell nTPM: 28.3
Samples: 6
Max nTPM: 37.8
Min nTPM: 21.9
P10809_1006
28.5
P10809_1024
21.9
P10809_1043
27.3
P10809_1062
29.1
P10809_1083
37.8
P10809_1097
25.0
Memory CD4 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 88.3
Min nTPM: 52.1
P10809_1014
67.6
P10809_1026
79.6
P10809_1045
88.3
P10809_1064
52.1
P10809_1086
56.1
P10809_1113
76.7
Memory CD8 T-cell nTPM: 19.8
Samples: 5
Max nTPM: 26.2
Min nTPM: 12.6
P10809_1012
26.2
P10809_1027
21.4
P10809_1046
16.0
P10809_1065
12.6
P10809_1111
23.0
Naive CD4 T-cell nTPM: 18.5
Samples: 6
Max nTPM: 24.4
Min nTPM: 13.3
P10809_1015
16.0
P10809_1030
15.3
P10809_1049
21.8
P10809_1068
24.4
P10809_1085
20.0
P10809_1112
13.3
Naive CD8 T-cell nTPM: 6.2
Samples: 6
Max nTPM: 7.1
Min nTPM: 4.7
P10809_1016
6.4
P10809_1031
4.7
P10809_1050
5.5
P10809_1069
7.1
P10809_1087
6.7
P10809_1110
6.8
T-reg nTPM: 88.8
Samples: 6
Max nTPM: 115.5
Min nTPM: 49.9
P10809_1018
82.9
P10809_1037
105.4
P10809_1056
49.9
P10809_1075
115.5
P10809_1094
92.2
P10809_1106
87.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
507.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 146.7
Min nTPM: 60.7
RHH5202_R3573
146.7
RHH5230_R3602
60.7
RHH5259_R3631
77.8
RHH5288_R3660
102.2
Effector memory CD8 T-cell nTPM: 73.4
Samples: 4
Max nTPM: 106.5
Min nTPM: 49.1
RHH5203_R3574
106.5
RHH5231_R3603
49.1
RHH5260_R3632
58.0
RHH5289_R3661
79.8
MAIT T-cell nTPM: 71.5
Samples: 4
Max nTPM: 81.6
Min nTPM: 59.0
RHH5233_R3605
81.6
RHH5205_R3576
81.6
RHH5262_R3634
63.6
RHH5297_R3663
59.0
Memory CD4 T-cell TFH nTPM: 507.7
Samples: 4
Max nTPM: 596.3
Min nTPM: 404.5
RHH5300_R3666
404.5
RHH5236_R3608
596.3
RHH5265_R3637
457.5
RHH5208_R3579
572.5
Memory CD4 T-cell Th1 nTPM: 175.0
Samples: 4
Max nTPM: 198.2
Min nTPM: 144.9
RHH5210_R3581
144.9
RHH5302_R3668
189.8
RHH5238_R3610
198.2
RHH5267_R3639
167.1
Memory CD4 T-cell Th1/Th17 nTPM: 198.4
Samples: 4
Max nTPM: 235.3
Min nTPM: 154.3
RHH5303_R3669
206.6
RHH5211_R3582
235.3
RHH5239_R3611
197.2
RHH5268_R3640
154.3
Memory CD4 T-cell Th17 nTPM: 272.3
Samples: 4
Max nTPM: 301.4
Min nTPM: 234.6
RHH5304_R3670
252.5
RHH5212_R3583
301.4
RHH5240_R3612
300.7
RHH5269_R3641
234.6
Memory CD4 T-cell Th2 nTPM: 139.2
Samples: 4
Max nTPM: 154.7
Min nTPM: 111.9
RHH5305_R3671
146.8
RHH5213_R3584
111.9
RHH5241_R3613
154.7
RHH5270_R3642
143.4
Naive CD4 T-cell nTPM: 51.9
Samples: 4
Max nTPM: 64.4
Min nTPM: 39.4
RHH5306_R3672
49.4
RHH5214_R3585
54.2
RHH5242_R3614
64.4
RHH5271_R3643
39.4
Naive CD8 T-cell nTPM: 15.1
Samples: 4
Max nTPM: 21.7
Min nTPM: 12.2
RHH5201_R3572
12.8
RHH5229_R3601
12.2
RHH5258_R3630
13.7
RHH5287_R3659
21.7
Non-Vd2 gdTCR nTPM: 37.7
Samples: 4
Max nTPM: 58.7
Min nTPM: 25.1
RHH5235_R3607
58.7
RHH5264_R3636
28.7
RHH5207_R3578
25.1
RHH5299_R3665
38.3
T-reg nTPM: 147.8
Samples: 4
Max nTPM: 190.7
Min nTPM: 123.9
RHH5301_R3667
144.0
RHH5237_R3609
190.7
RHH5266_R3638
132.6
RHH5209_R3580
123.9
Terminal effector memory CD4 T-cell nTPM: 42.3
Samples: 2
Max nTPM: 56.6
Min nTPM: 27.9
RHH5243_R3615
27.9
RHH5272_R3644
56.6
Terminal effector memory CD8 T-cell nTPM: 31.3
Samples: 4
Max nTPM: 34.8
Min nTPM: 26.6
RHH5232_R3604
29.6
RHH5204_R3575
34.8
RHH5261_R3633
26.6
RHH5296_R3662
34.3
Vd2 gdTCR nTPM: 78.6
Samples: 4
Max nTPM: 107.9
Min nTPM: 38.1
RHH5234_R3606
107.9
RHH5206_R3577
38.1
RHH5263_R3635
80.6
RHH5298_R3664
87.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
