HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:13.8 nTPM
HPA Brain:12.7 nTPM
GTEx:13.8 nTPM
FANTOM5:34.7 Scaled Tags Per Million
Pig:20.5 nTPM
Mouse:28.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042567
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1898 Male, age 80, left hemisphere 12.6
1911 Female, age 85, right hemisphere 12.5
2529 Female, age 94, left hemisphere 12.0
1855 Male, age 76, left hemisphere 10.6
2621 Female, age 67, right hemisphere 10.5
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 11.0
2528 Male, age 74, both hemispheres 11.8
2010 Male, age 76, both hemispheres 11.7
1927 Female, age 91, both hemispheres 11.5
2246 Female, age 85, both hemispheres 11.3
2530 Female, age 94, left hemisphere 10.3
2531 Female, age 67, both hemispheres 9.6
Entorhinal gyrus
nTPM: 10.8
2117 Female, age 91, right hemisphere 13.9
1938 Female, age 85, left hemisphere 11.9
2686 Male, age 75, right hemisphere 10.9
2764 Male, age 80, right hemisphere 10.2
1787 Male, age 76, left hemisphere 10.0
2613 Female, age 94, left hemisphere 7.9
Hippocampus, CA1
nTPM: 11.5
2527 Male, age 74, both hemispheres 12.2
1873 Female, age 85, both hemispheres 11.5
2045 Male, age 76, both hemispheres 11.5
2749 Male, age 80, left hemisphere 11.5
2082 Female, age 91, right hemisphere 10.5
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 12.2
1963 Male, age 80, left hemisphere 11.6
2249 Male, age 74, both hemispheres 11.6
2113 Female, age 91, right hemisphere 11.4
1940 Female, age 85, left hemisphere 11.2
2437 Female, age 94, left hemisphere 10.4
Hippocampus, CA3
nTPM: 10.9
1891 Female, age 85, both hemispheres 13.4
1867 Male, age 76, both hemispheres 12.9
2137 Male, age 80, left hemisphere 11.1
2436 Male, age 74, both hemispheres 9.8
2620 Female, age 94, left hemisphere 9.7
2861 Female, age 67, both hemispheres 8.8
Parahippocampal cortex
nTPM: 11.4
1933 Female, age 85, both hemispheres 13.3
1850 Male, age 80, both hemispheres 13.2
1990 Female, age 91, right hemisphere 11.9
2692 Male, age 74, both hemispheres 11.7
2018 Male, age 76, both hemispheres 11.4
2693 Female, age 94, both hemispheres 11.1
2250 Female, age 67, right hemisphere 11.0
2532 Female, age 72, left hemisphere 10.9
2245 Female, age 91, both hemispheres 10.8
2622 Female, age 67, right hemisphere 8.3
Perirhinal gyrus
nTPM: 12.7
1841 Female, age 85, right hemisphere 13.7
2521 Female, age 94, right hemisphere 13.4
1794 Male, age 80, right hemisphere 12.7
2848 Male, age 76, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.6
Subiculum
nTPM: 11.6
1901 Male, age 80, both hemispheres 12.7
2438 Female, age 94, left hemisphere 12.4
2042 Male, age 76, both hemispheres 11.8
2729 Female, age 91, right hemisphere 11.5
1977 Female, age 85, both hemispheres 11.4
2619 Male, age 74, both hemispheres 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 24.8
Min nTPM: 8.5
Std nTPM: 2.9
Median nTPM: 13.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 21.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 21.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 20.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 20.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 20.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 19.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.7
FF:10153-102I9 76 years, female 35.1
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.5
Pig sample Sample description nTPM
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.1
Sample A Female 20.7
Sample B Female 19.6
Sample C Male 18.1
Sample D Male 19.1
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 22.6
Min nTPM: 16.4
Sample A Female 21.9
Sample B Female 21.3
Sample C Male 22.6
Sample D Male 16.4
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.1
Sample A Female 19.6
Sample B Female 21.5
Sample C Male 21.4
Sample D Male 18.1
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.5
Sample A Female 16.5
Sample B Female 15.5
Sample C Male 18.3
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 24.2
Sample A Male 30.7
Sample B Male 29.9
Sample C Female 24.2
Sample D Female 29.6
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 18.6
Sample A Male 34.9
Sample B Male 18.6
Sample C Female 32.6
Sample D Female 29.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69442467 Antisense, RP_050414_03_D01, Mouse strain C57BL/6J (56 days, male) 1.0

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