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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
127.6
nTPM
Monaco:
192.0
nTPM
Schmiedel:
99.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.6
HPA sample
nTPM
gdT-cell nTPM: 48.2
Samples: 6
Max nTPM: 58.9
Min nTPM: 35.4
P10809_1007
35.4
P10809_1022
58.9
P10809_1041
39.0
P10809_1060
47.9
P10809_1077
53.4
P10809_1098
54.3
MAIT T-cell nTPM: 51.8
Samples: 6
Max nTPM: 60.3
Min nTPM: 34.2
P10809_1006
46.7
P10809_1024
58.4
P10809_1043
34.2
P10809_1062
60.1
P10809_1083
51.3
P10809_1097
60.3
Memory CD4 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 67.9
Min nTPM: 41.9
P10809_1014
43.3
P10809_1026
49.3
P10809_1045
41.9
P10809_1064
52.7
P10809_1086
67.8
P10809_1113
67.9
Memory CD8 T-cell nTPM: 50.0
Samples: 5
Max nTPM: 58.4
Min nTPM: 39.7
P10809_1012
39.7
P10809_1027
56.3
P10809_1046
39.9
P10809_1065
55.9
P10809_1111
58.4
Naive CD4 T-cell nTPM: 57.7
Samples: 6
Max nTPM: 77.2
Min nTPM: 39.8
P10809_1015
50.3
P10809_1030
51.2
P10809_1049
39.8
P10809_1068
64.8
P10809_1085
77.2
P10809_1112
63.0
Naive CD8 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 70.6
Min nTPM: 41.2
P10809_1016
41.2
P10809_1031
58.6
P10809_1050
42.3
P10809_1069
53.0
P10809_1087
70.6
P10809_1110
57.0
T-reg nTPM: 127.6
Samples: 6
Max nTPM: 160.9
Min nTPM: 80.5
P10809_1018
80.5
P10809_1037
143.4
P10809_1056
97.1
P10809_1075
134.0
P10809_1094
149.8
P10809_1106
160.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
192.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 144.0
Samples: 4
Max nTPM: 170.5
Min nTPM: 117.6
RHH5202_R3573
170.5
RHH5230_R3602
163.8
RHH5259_R3631
124.2
RHH5288_R3660
117.6
Effector memory CD8 T-cell nTPM: 192.0
Samples: 4
Max nTPM: 198.5
Min nTPM: 180.5
RHH5203_R3574
180.5
RHH5231_R3603
192.3
RHH5260_R3632
196.6
RHH5289_R3661
198.5
MAIT T-cell nTPM: 176.3
Samples: 4
Max nTPM: 226.3
Min nTPM: 107.4
RHH5233_R3605
189.4
RHH5205_R3576
226.3
RHH5262_R3634
182.1
RHH5297_R3663
107.4
Memory CD4 T-cell TFH nTPM: 134.8
Samples: 4
Max nTPM: 156.6
Min nTPM: 89.1
RHH5300_R3666
89.1
RHH5236_R3608
156.6
RHH5265_R3637
154.3
RHH5208_R3579
139.2
Memory CD4 T-cell Th1 nTPM: 131.5
Samples: 4
Max nTPM: 155.5
Min nTPM: 110.5
RHH5210_R3581
142.3
RHH5302_R3668
110.5
RHH5238_R3610
117.5
RHH5267_R3639
155.5
Memory CD4 T-cell Th1/Th17 nTPM: 158.5
Samples: 4
Max nTPM: 184.8
Min nTPM: 129.9
RHH5303_R3669
134.6
RHH5211_R3582
184.5
RHH5239_R3611
129.9
RHH5268_R3640
184.8
Memory CD4 T-cell Th17 nTPM: 174.3
Samples: 4
Max nTPM: 204.8
Min nTPM: 120.9
RHH5304_R3670
120.9
RHH5212_R3583
176.8
RHH5240_R3612
204.8
RHH5269_R3641
194.6
Memory CD4 T-cell Th2 nTPM: 171.2
Samples: 4
Max nTPM: 198.2
Min nTPM: 142.1
RHH5305_R3671
142.1
RHH5213_R3584
198.2
RHH5241_R3613
174.3
RHH5270_R3642
170.3
Naive CD4 T-cell nTPM: 142.3
Samples: 4
Max nTPM: 154.3
Min nTPM: 122.9
RHH5306_R3672
122.9
RHH5214_R3585
149.4
RHH5242_R3614
154.3
RHH5271_R3643
142.7
Naive CD8 T-cell nTPM: 169.8
Samples: 4
Max nTPM: 202.8
Min nTPM: 148.9
RHH5201_R3572
202.8
RHH5229_R3601
149.1
RHH5258_R3630
148.9
RHH5287_R3659
178.5
Non-Vd2 gdTCR nTPM: 182.7
Samples: 4
Max nTPM: 215.4
Min nTPM: 131.5
RHH5235_R3607
169.5
RHH5264_R3636
215.4
RHH5207_R3578
214.4
RHH5299_R3665
131.5
T-reg nTPM: 171.0
Samples: 4
Max nTPM: 203.3
Min nTPM: 136.4
RHH5301_R3667
136.4
RHH5237_R3609
169.9
RHH5266_R3638
203.3
RHH5209_R3580
174.5
Terminal effector memory CD4 T-cell nTPM: 156.7
Samples: 2
Max nTPM: 161.7
Min nTPM: 151.7
RHH5243_R3615
151.7
RHH5272_R3644
161.7
Terminal effector memory CD8 T-cell nTPM: 185.7
Samples: 4
Max nTPM: 252.8
Min nTPM: 148.9
RHH5232_R3604
191.8
RHH5204_R3575
148.9
RHH5261_R3633
252.8
RHH5296_R3662
149.4
Vd2 gdTCR nTPM: 160.7
Samples: 4
Max nTPM: 191.5
Min nTPM: 110.9
RHH5234_R3606
191.5
RHH5206_R3577
180.5
RHH5263_R3635
159.9
RHH5298_R3664
110.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
