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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
311.1
nTPM
Monaco:
529.4
nTPM
Schmiedel:
769.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
311.1
HPA sample
nTPM
gdT-cell nTPM: 242.8
Samples: 6
Max nTPM: 293.4
Min nTPM: 196.5
P10809_1007
210.9
P10809_1022
293.4
P10809_1041
291.0
P10809_1060
196.5
P10809_1077
209.9
P10809_1098
255.0
MAIT T-cell nTPM: 295.8
Samples: 6
Max nTPM: 354.1
Min nTPM: 243.8
P10809_1006
286.3
P10809_1024
354.1
P10809_1043
287.5
P10809_1062
276.2
P10809_1083
243.8
P10809_1097
326.8
Memory CD4 T-cell nTPM: 252.5
Samples: 6
Max nTPM: 284.3
Min nTPM: 222.0
P10809_1014
231.0
P10809_1026
268.0
P10809_1045
284.3
P10809_1064
222.0
P10809_1086
242.9
P10809_1113
266.9
Memory CD8 T-cell nTPM: 268.2
Samples: 5
Max nTPM: 292.1
Min nTPM: 219.9
P10809_1012
269.3
P10809_1027
282.1
P10809_1046
292.1
P10809_1065
219.9
P10809_1111
277.7
Naive CD4 T-cell nTPM: 209.9
Samples: 6
Max nTPM: 231.1
Min nTPM: 179.0
P10809_1015
179.0
P10809_1030
220.3
P10809_1049
218.0
P10809_1068
231.1
P10809_1085
204.1
P10809_1112
206.9
Naive CD8 T-cell nTPM: 200.5
Samples: 6
Max nTPM: 221.6
Min nTPM: 179.9
P10809_1016
182.2
P10809_1031
201.0
P10809_1050
204.0
P10809_1069
214.1
P10809_1087
221.6
P10809_1110
179.9
T-reg nTPM: 311.1
Samples: 6
Max nTPM: 351.5
Min nTPM: 284.8
P10809_1018
294.4
P10809_1037
284.8
P10809_1056
306.9
P10809_1075
298.2
P10809_1094
351.5
P10809_1106
330.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
529.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 404.6
Samples: 4
Max nTPM: 419.1
Min nTPM: 373.2
RHH5202_R3573
373.2
RHH5230_R3602
416.8
RHH5259_R3631
419.1
RHH5288_R3660
409.3
Effector memory CD8 T-cell nTPM: 529.4
Samples: 4
Max nTPM: 633.6
Min nTPM: 387.4
RHH5203_R3574
633.6
RHH5231_R3603
387.4
RHH5260_R3632
515.0
RHH5289_R3661
581.5
MAIT T-cell nTPM: 468.9
Samples: 4
Max nTPM: 502.7
Min nTPM: 434.6
RHH5233_R3605
434.6
RHH5205_R3576
502.7
RHH5262_R3634
499.9
RHH5297_R3663
438.5
Memory CD4 T-cell TFH nTPM: 455.3
Samples: 4
Max nTPM: 483.7
Min nTPM: 423.1
RHH5300_R3666
451.9
RHH5236_R3608
423.1
RHH5265_R3637
462.5
RHH5208_R3579
483.7
Memory CD4 T-cell Th1 nTPM: 399.0
Samples: 4
Max nTPM: 504.1
Min nTPM: 297.2
RHH5210_R3581
340.9
RHH5302_R3668
453.7
RHH5238_R3610
297.2
RHH5267_R3639
504.1
Memory CD4 T-cell Th1/Th17 nTPM: 452.0
Samples: 4
Max nTPM: 470.5
Min nTPM: 426.0
RHH5303_R3669
448.7
RHH5211_R3582
462.8
RHH5239_R3611
426.0
RHH5268_R3640
470.5
Memory CD4 T-cell Th17 nTPM: 480.5
Samples: 4
Max nTPM: 511.3
Min nTPM: 434.8
RHH5304_R3670
488.8
RHH5212_R3583
434.8
RHH5240_R3612
486.9
RHH5269_R3641
511.3
Memory CD4 T-cell Th2 nTPM: 472.0
Samples: 4
Max nTPM: 513.6
Min nTPM: 402.2
RHH5305_R3671
473.4
RHH5213_R3584
513.6
RHH5241_R3613
402.2
RHH5270_R3642
498.9
Naive CD4 T-cell nTPM: 353.9
Samples: 4
Max nTPM: 390.3
Min nTPM: 282.0
RHH5306_R3672
376.1
RHH5214_R3585
367.1
RHH5242_R3614
282.0
RHH5271_R3643
390.3
Naive CD8 T-cell nTPM: 288.4
Samples: 4
Max nTPM: 311.5
Min nTPM: 246.5
RHH5201_R3572
311.5
RHH5229_R3601
246.5
RHH5258_R3630
290.5
RHH5287_R3659
305.2
Non-Vd2 gdTCR nTPM: 433.9
Samples: 4
Max nTPM: 486.1
Min nTPM: 400.7
RHH5235_R3607
402.6
RHH5264_R3636
446.0
RHH5207_R3578
486.1
RHH5299_R3665
400.7
T-reg nTPM: 441.7
Samples: 4
Max nTPM: 506.3
Min nTPM: 400.1
RHH5301_R3667
427.1
RHH5237_R3609
400.1
RHH5266_R3638
506.3
RHH5209_R3580
433.1
Terminal effector memory CD4 T-cell nTPM: 415.3
Samples: 2
Max nTPM: 475.4
Min nTPM: 355.2
RHH5243_R3615
355.2
RHH5272_R3644
475.4
Terminal effector memory CD8 T-cell nTPM: 440.6
Samples: 4
Max nTPM: 487.9
Min nTPM: 388.2
RHH5232_R3604
408.7
RHH5204_R3575
388.2
RHH5261_R3633
487.9
RHH5296_R3662
477.5
Vd2 gdTCR nTPM: 447.7
Samples: 4
Max nTPM: 483.0
Min nTPM: 424.1
RHH5234_R3606
437.5
RHH5206_R3577
446.3
RHH5263_R3635
483.0
RHH5298_R3664
424.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.