We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.2
nTPM
Monaco:
166.4
nTPM
Schmiedel:
45.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.2
HPA sample
nTPM
gdT-cell nTPM: 31.2
Samples: 6
Max nTPM: 39.2
Min nTPM: 23.1
P10809_1007
35.7
P10809_1022
39.2
P10809_1041
31.0
P10809_1060
24.9
P10809_1077
23.1
P10809_1098
33.2
MAIT T-cell nTPM: 1.9
Samples: 6
Max nTPM: 4.3
Min nTPM: 0.3
P10809_1006
0.3
P10809_1024
1.2
P10809_1043
1.2
P10809_1062
4.3
P10809_1083
1.7
P10809_1097
2.8
Memory CD4 T-cell nTPM: 3.3
Samples: 6
Max nTPM: 7.6
Min nTPM: 0.6
P10809_1014
0.6
P10809_1026
1.0
P10809_1045
3.0
P10809_1064
7.6
P10809_1086
7.0
P10809_1113
0.6
Memory CD8 T-cell nTPM: 9.5
Samples: 5
Max nTPM: 14.1
Min nTPM: 5.3
P10809_1012
5.3
P10809_1027
8.6
P10809_1046
14.1
P10809_1065
13.9
P10809_1111
5.8
Naive CD4 T-cell nTPM: 0.9
Samples: 6
Max nTPM: 3.9
Min nTPM: 0.0
P10809_1015
0.6
P10809_1030
0.0
P10809_1049
0.7
P10809_1068
0.0
P10809_1085
3.9
P10809_1112
0.1
Naive CD8 T-cell nTPM: 7.7
Samples: 6
Max nTPM: 15.6
Min nTPM: 2.2
P10809_1016
2.2
P10809_1031
4.5
P10809_1050
6.9
P10809_1069
15.6
P10809_1087
13.1
P10809_1110
4.0
T-reg nTPM: 1.3
Samples: 6
Max nTPM: 3.3
Min nTPM: 0.0
P10809_1018
3.3
P10809_1037
1.6
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
1.9
P10809_1106
0.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6.3
Samples: 4
Max nTPM: 12.7
Min nTPM: 0.9
RHH5202_R3573
0.9
RHH5230_R3602
1.3
RHH5259_R3631
12.7
RHH5288_R3660
10.4
Effector memory CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 135.7
Min nTPM: 44.1
RHH5203_R3574
44.1
RHH5231_R3603
69.8
RHH5260_R3632
100.7
RHH5289_R3661
135.7
MAIT T-cell nTPM: 8.5
Samples: 4
Max nTPM: 15.4
Min nTPM: 1.7
RHH5233_R3605
1.7
RHH5205_R3576
15.4
RHH5262_R3634
9.2
RHH5297_R3663
7.8
Memory CD4 T-cell TFH nTPM: 4.1
Samples: 4
Max nTPM: 9.1
Min nTPM: 1.6
RHH5300_R3666
2.9
RHH5236_R3608
2.9
RHH5265_R3637
1.6
RHH5208_R3579
9.1
Memory CD4 T-cell Th1 nTPM: 14.9
Samples: 4
Max nTPM: 25.4
Min nTPM: 9.6
RHH5210_R3581
9.6
RHH5302_R3668
12.4
RHH5238_R3610
25.4
RHH5267_R3639
12.2
Memory CD4 T-cell Th1/Th17 nTPM: 8.7
Samples: 4
Max nTPM: 15.0
Min nTPM: 3.7
RHH5303_R3669
9.1
RHH5211_R3582
15.0
RHH5239_R3611
3.7
RHH5268_R3640
7.1
Memory CD4 T-cell Th17 nTPM: 7.5
Samples: 4
Max nTPM: 9.1
Min nTPM: 3.7
RHH5304_R3670
8.9
RHH5212_R3583
9.1
RHH5240_R3612
8.1
RHH5269_R3641
3.7
Memory CD4 T-cell Th2 nTPM: 9.3
Samples: 4
Max nTPM: 12.8
Min nTPM: 6.2
RHH5305_R3671
7.5
RHH5213_R3584
10.8
RHH5241_R3613
6.2
RHH5270_R3642
12.8
Naive CD4 T-cell nTPM: 2.3
Samples: 4
Max nTPM: 5.0
Min nTPM: 0.5
RHH5306_R3672
1.1
RHH5214_R3585
5.0
RHH5242_R3614
2.7
RHH5271_R3643
0.5
Naive CD8 T-cell nTPM: 0.4
Samples: 4
Max nTPM: 1.5
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
1.5
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 142.8
Samples: 4
Max nTPM: 184.8
Min nTPM: 127.4
RHH5235_R3607
128.7
RHH5264_R3636
127.4
RHH5207_R3578
184.8
RHH5299_R3665
130.2
T-reg nTPM: 8.0
Samples: 4
Max nTPM: 9.6
Min nTPM: 6.7
RHH5301_R3667
7.3
RHH5237_R3609
8.5
RHH5266_R3638
9.6
RHH5209_R3580
6.7
Terminal effector memory CD4 T-cell nTPM: 159.3
Samples: 2
Max nTPM: 209.7
Min nTPM: 108.9
RHH5243_R3615
209.7
RHH5272_R3644
108.9
Terminal effector memory CD8 T-cell nTPM: 166.4
Samples: 4
Max nTPM: 207.7
Min nTPM: 130.0
RHH5232_R3604
130.0
RHH5204_R3575
136.4
RHH5261_R3633
207.7
RHH5296_R3662
191.6
Vd2 gdTCR nTPM: 117.2
Samples: 4
Max nTPM: 224.4
Min nTPM: 45.5
RHH5234_R3606
45.5
RHH5206_R3577
224.4
RHH5263_R3635
107.6
RHH5298_R3664
91.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
